RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 HBS1LQ9Y450 684 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 TNIKQ9UKE5 1360 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 A0A0U1RQJ8 604 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 C17orf102A2RUQ5 167 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 CPED1A4D0V7 1026 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 GSAPA4D1B5 854 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 HSPB2A8KAH6 182 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 AP4M1O00189 453 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 PRYO14603 147 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 MTRF1O75570 445 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 RHOBTB1O94844 696 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 GPANK1O95872 356 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 NPPAP01160 153 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 GH2P01242 217 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 IL1BP01584 269 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 HLA-DQA2P01906 255 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 CYP1A2P05177 515 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 RFPL3SP0C7P2 107 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 DLATP10515 647 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 PTGER1P34995 402 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 CCT6AP40227 531 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 PRCPP42785 496 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 MMP13P45452 471 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 NCKAP1LP55160 1127 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 SUMO2P61956 95 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 POLR2LP62875 67 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 SORDQ00796 357 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 OCA2Q04671 838 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 SLC18A2Q05940 514 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 LCP2Q13094 533 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 NFYCQ13952 458 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 NEDD9Q14511 834 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 ARHGAP19Q14CB8 494 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 LARS2Q15031 903 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 HSPB2Q16082 182 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 FBXO48Q5FWF7 155 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 C9orf50Q5SZB4 431 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 CYB5D1Q6P9G0 228 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 ENPP7Q6UWV6 458 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 GPR180Q86V85 440 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 GRAMD2AQ8IUY3 354 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 DENND6AQ8IWF6 608 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 KLHDC8AQ8IYD2 350 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 RNF148Q8N7C7 305 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 OR8J1Q8NGP2 316 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 BBS10Q8TAM1 723 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 XAGE5Q8WWM1 108 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 DVL3Q92997 716 aaPredicted RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 FAM210AQ96ND0 272 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 PCDHB18PQ96TA0 734 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 FEVQ99581 238 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 FAM213AQ9BRX8 229 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 IFT27Q9BW83 186 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 FRMD8Q9BZ67 464 aaPredicted RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 ATG10Q9H0Y0 220 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 HIPK3Q9H422 1215 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 EVA1AQ9H8M9 152 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 AGO3Q9H9G7 860 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 L2HGDHQ9H9P8 463 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.94□□□□□ -1.78
SKP1-209ENST00000522552 CNOT2Q9NZN8 540 aaKnown RBP3.94□□□□□ -1.78
SKP1-209ENST00000522552 CLEC4AQ9UMR7 237 aa3.94□□□□□ -1.78
SKP1-209ENST00000522552 FEZF1A0PJY2 475 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 MYADML2A6NDP7 307 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FAM90A10PA6NDY2 464 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 H0YGN5 161 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 K7EQM0 130 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 EBAG9O00559 213 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 CES2O00748 559 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 AP5Z1O43299 807 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FOXD2O60548 495 aaPredicted RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 TBX19O60806 448 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 CTAG2O75638 210 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FLOT1O75955 427 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ACSL3O95573 720 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 IGHEP01854 428 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ICAM1P05362 532 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ADH4P08319 380 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 RAB40ALP0C0E4 278 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 DANCRP0C864 163 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 SPP1P10451 314 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 CCDC130P13994 396 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 RPA2P15927 270 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 DDX5P17844 614 aaKnown RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 GATA3P23771 443 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 ITPKBP27987 946 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 GABRA5P31644 462 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 RDXP35241 583 aaKnown RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 GNL1P36915 607 aaPredicted RBP3.93□□□□□ -1.78
SKP1-209ENST00000522552 E2F1Q01094 437 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 SPAG1Q07617 926 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 PNLIPRP3Q17RR3 467 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 RNF151Q2KHN1 245 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 TMEM41BQ5BJD5 291 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 PRAMEF20Q5VT98 475 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 LRRC38Q5VT99 294 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 PRAMEF7Q5VXH5 474 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 TBC1D9BQ66K14 1250 aa3.93□□□□□ -1.78
SKP1-209ENST00000522552 FOXR2Q6PJQ5 311 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms