RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 P2RY8Q86VZ1 359 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 CAMKK1Q8N5S9 505 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 ZNF655Q8N720 491 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 FCRL3Q96P31 734 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 LRRC3Q9BY71 257 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 TPK1Q9H3S4 243 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 FAM234BA2RU67 622 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 MTPNP58546 118 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 DNAJB13P59910 316 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 RFTN2Q52LD8 501 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 PAQR3Q6TCH7 311 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 NSMCE3Q96MG7 304 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 OR51F1A6NGY5 319 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 ATG13O75143 517 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 SIX3O95343 332 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 STAT5AP42229 794 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 MAPK9P45984 424 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 KHDRBS2Q5VWX1 349 aaKnown RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 OR13C4Q8NGS5 318 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 MRM3Q9HC36 420 aaKnown RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 CLDN25C9JDP6 229 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 E7ENX8 843 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 FGBP02675 491 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 ATP4BP51164 291 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 C2orf80Q0P641 193 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 ZNHIT3Q15649 155 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 EGFL6Q8IUX8 553 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 KIFC1Q9BW19 673 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 OXCT2Q9BYC2 517 aaPredicted RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 FAM83DQ9H4H8 585 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 DNAAF2Q9NVR5 837 aaKnown RBP13.62□□□□□ -0.23
SYNPO-205ENST00000522122 CMTM6Q9NX76 183 aa13.62□□□□□ -0.23
SYNPO-205ENST00000522122 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 TMEM233B4DJY2 109 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 FAM163BP0C2L3 166 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 SSR2P43308 183 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 RPS14P62263 151 aaKnown RBP13.61□□□□□ -0.23
SYNPO-205ENST00000522122 NDUFAF6Q330K2 333 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 HFE2Q6ZVN8 426 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ZDHHC21Q8IVQ6 265 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 HPS1Q92902 700 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 C1GALT1C1Q96EU7 318 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 MFSD1Q9H3U5 465 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 AKTIPQ9H8T0 292 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 DNAJB9Q9UBS3 223 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 SEC14L3Q9UDX4 400 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ARL5AQ9Y689 179 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ISM1B1AKI9 464 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 OR6A2O95222 327 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 MAGP20916 626 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 BIKQ13323 160 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ZZZ3Q8IYH5 903 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 COLGALT2Q8IYK4 626 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 RAB2BQ8WUD1 216 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 AASDHPPTQ9NRN7 309 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 WBP11Q9Y2W2 641 aaKnown RBP13.61□□□□□ -0.23
SYNPO-205ENST00000522122 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ADAMDEC1O15204 470 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
SYNPO-205ENST00000522122 SLC10A7Q0GE19 358 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ZNF423Q2M1K9 1284 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 ERMP1Q7Z2K6 904 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 HTRA1Q92743 480 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 TLR6Q9Y2C9 796 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 TCRBV5S1A1TA0A578 114 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 NEDD8-MDP1E9PL57 170 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 PSMD11O00231 422 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 PSMA1P25786 263 aaKnown RBP13.61□□□□□ -0.23
SYNPO-205ENST00000522122 GALNT2Q10471 571 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 KCNA10Q16322 511 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 KLHL12Q53G59 568 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 XAGE5Q8WWM1 108 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 CXorf40BQ96DE9 158 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 TCF25Q9BQ70 676 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
SYNPO-205ENST00000522122 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
SYNPO-205ENST00000522122 PTBP2Q9UKA9 531 aaKnown RBP13.61□□□□□ -0.23
SYNPO-205ENST00000522122 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.6□□□□□ -0.23
SYNPO-205ENST00000522122 URADA6NGE7 173 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 UGT2B17O75795 530 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 FOXM1Q08050 763 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 OLIG2Q13516 323 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 SPATS1Q496A3 300 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 RAB6CQ53S08 254 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 GCNT6Q5T4J0 391 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 MSANTD2Q6P1R3 559 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 FAR1Q8WVX9 515 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 OR8D1Q8WZ84 308 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 LRRC58Q96CX6 371 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 YTHDF1Q9BYJ9 559 aaKnown RBP13.6□□□□□ -0.23
SYNPO-205ENST00000522122 RAB6CQ9H0N0 254 aa13.6□□□□□ -0.23
SYNPO-205ENST00000522122 CACNG4Q9UBN1 327 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms