RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TMEM161AQ9NX61 479 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 GTF2A1LQ9UNN4 478 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 TRAF3IP3Q9Y228 551 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 GDAQ9Y2T3 454 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 EVPLQ92817 2033 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 MYH7BA7E2Y1 1941 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SCN10AQ9Y5Y9 1956 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TTC26A0AVF1 554 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ZNF233A6NK53 670 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 E7EVH7 732 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CLIC2O15247 247 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 OGTO15294 1046 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ITM2AO43736 263 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CALUO43852 315 aaPredicted RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 FAM189A1O60320 539 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 KCNJ13O60928 360 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 SERPINI2O75830 405 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 SOX30O94993 753 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 GJB5O95377 273 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 METTL18O95568 372 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 FGFR1OPO95684 399 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 NR3C1P04150 777 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ADRB2P07550 413 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 KCNE1P15382 129 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CCNE1P24864 410 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ADSSP30520 456 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 MATR3P43243 847 aaKnown RBP eCLIP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 MAPK9P45984 424 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ACOT2P49753 483 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 PMS2P54278 862 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 PNLIPRP1P54315 467 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 OSTNP61366 133 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 FKBP3Q00688 224 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 LRRC63Q05C16 580 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 THOC5Q13769 683 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 SMAD1Q15797 465 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 EDRF1Q3B7T1 1238 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 SYTL3Q4VX76 610 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ZCWPW2Q504Y3 356 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 DCAF6Q58WW2 860 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 XKR4Q5GH76 650 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CLLU1OSQ5K130 101 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CENPPQ6IPU0 288 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 LIN54Q6MZP7 749 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TTI2Q6NXR4 508 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CAVIN1Q6NZI2 390 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ARMCX5Q6P1M9 558 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 SPSB3Q6PJ21 355 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ALKAL1Q6UXT8 129 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 Q6ZTC4 211 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 FJX1Q86VR8 437 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 SUGP1Q8IWZ8 645 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CD302Q8IX05 232 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 THNSL1Q8IYQ7 743 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TDHQ8IZJ6 230 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 GPD1LQ8N335 351 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CLIP4Q8N3C7 705 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TEX45Q8NA69 505 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 XXYLT1Q8NBI6 393 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 NOC3LQ8WTT2 800 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 NELFBQ8WX92 580 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ADAMTS14Q8WXS8 1223 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 POMGNT1Q8WZA1 660 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 P2RX5Q93086 422 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 ZNF689Q96CS4 500 aaPredicted RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CASD1Q96PB1 797 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 DUX5Q96PT3 197 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 YME1L1Q96TA2 773 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 GAD1Q99259 594 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 RAD9AQ99638 391 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TSG101Q99816 390 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CBWD1Q9BRT8 395 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 FAM213AQ9BRX8 229 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 MSTO1Q9BUK6 570 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 APOL6Q9BWW8 343 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TRIM6Q9C030 488 aaPredicted RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 TMEM117Q9H0C3 514 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 NXF3Q9H4D5 531 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 RMI1Q9H9A7 625 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 RPF1Q9H9Y2 349 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 G6PC2Q9NQR9 355 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 MIOSQ9NXC5 875 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 GRHL1Q9NZI5 618 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 PLEKHB1Q9UF11 243 aaPredicted RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 RWDD2AQ9UIY3 292 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 KCND3Q9UK17 655 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CPSF3Q9UKF6 684 aaKnown RBP3.29□□□□□ -1.88
VPS13B-209ENST00000521559 HES2Q9Y543 173 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 RAI2Q9Y5P3 530 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 MCM3APO60318 1980 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 MYH6P13533 1939 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 KIAA1217Q5T5P2 1943 aa3.29□□□□□ -1.88
VPS13B-209ENST00000521559 CKAP5Q14008 2032 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SMIM28A0A1B0GU29 152 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 BICDL2A1A5D9 508 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 GOLGA8IPA6NC78 632 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 OR6C68A6NDL8 312 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ARL5CA6NH57 179 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 FAM90A20PA6NIJ5 464 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 GOLGA8JA6NMD2 632 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms