RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 U3KQV3 271 aa9.99□□□□□ -0.81
MCF2-209ENST00000520602 A0A1W2PP18 115 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 GSTT1P30711 240 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 CCT8P50990 548 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 CAMK2GQ13555 558 aaPredicted RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 PTGR1Q14914 329 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 GAREM2Q75VX8 874 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 GPR180Q86V85 440 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ZDHHC13Q8IUH4 622 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 TMEM132CQ8N3T6 1108 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 BEND7Q8N7W2 519 aaPredicted RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 CHST14Q8NCH0 376 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 TSPAN14Q8NG11 270 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PNPT1Q8TCS8 783 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 DUS2Q9NX74 493 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 IL37Q9NZH6 218 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 SUCOQ9UBS9 1254 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 PCTPQ9UKL6 214 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 SLC22A14Q9Y267 594 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PCNTO95613 3336 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 NPIPB15A6NHN6 443 aaPredicted RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 PRLP01236 227 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 CAPN3P20807 821 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 SLC7A1P30825 629 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 DGKGP49619 791 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PRIM2P49643 509 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ERVPABLB-1P60509 514 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PLA2G4EQ3MJ16 856 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ATP13A5Q4VNC0 1218 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 GPRC6AQ5T6X5 926 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 LARP4Q71RC2 724 aaKnown RBP eCLIP9.98□□□□□ -0.81
MCF2-209ENST00000520602 HORMAD1Q86X24 394 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 APLFQ8IW19 511 aaPredicted RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 FAM9CQ8IZT9 166 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ZNF557Q8N988 423 aaPredicted RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 TRAPPC9Q96Q05 1148 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 BTBD9Q96Q07 612 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PANX1Q96RD7 426 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 HTATIP2Q9BUP3 242 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 SLC46A2Q9BY10 475 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 DNAJC11Q9NVH1 559 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 LHX3Q9UBR4 397 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 CNOT6Q9ULM6 557 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 PCDHGA7Q9Y5G6 932 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ANK1P16157 1881 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 hCG_2014768A0A024R1R8 64 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 MYOCOSA0A1B0GUC4 107 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 FAM234BA2RU67 622 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 RFXANKO14593 260 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 KPNA5O15131 536 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ALDOCP09972 364 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 ACADVLP49748 655 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 CLCN4P51793 760 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 WDR5P61964 334 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 NFKB2Q00653 900 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PLCL1Q15111 1095 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 PHKG1Q16816 387 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 SPESP1Q6UW49 350 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 CFAP206Q8IYR0 622 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 IRF7Q92985 503 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 TPD52L3Q96J77 140 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 OSBPL11Q9BXB4 747 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 UGT2B28Q9BY64 529 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 GMPR2Q9P2T1 348 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 DEC1Q9P2X7 70 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 ADGRE2Q9UHX3 823 aa9.98□□□□□ -0.81
MCF2-209ENST00000520602 OAS3Q9Y6K5 1087 aaKnown RBP9.98□□□□□ -0.81
MCF2-209ENST00000520602 TARM1B6A8C7 271 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ARPC2O15144 300 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 HS6ST1O60243 411 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ABLIM3O94929 683 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RHOP08100 348 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ANXA6P08133 673 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 MAPK10P53779 464 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 GALNT1Q10472 559 aaPredicted RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 PPP1R8Q12972 351 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 IHHQ14623 411 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TYSND1Q2T9J0 566 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 PTCHD3Q3KNS1 767 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 LIN52Q52LA3 116 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 LETMD1Q6P1Q0 360 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TMEM220Q6QAJ8 160 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RBM44Q6ZP01 1051 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 SLC15A3Q8IY34 581 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ZNF683Q8IZ20 524 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 TCEAL4Q96EI5 215 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 PLEKHG4BQ96PX9 1271 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RETREG1Q9H6L5 497 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 PDFQ9HBH1 243 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 DPP7Q9UHL4 492 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 CLEC4EQ9ULY5 219 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 CEP290O15078 2479 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 SRCP12931 536 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 RPL5P46777 297 aaKnown RBP9.97□□□□□ -0.81
MCF2-209ENST00000520602 BIRC2Q13490 618 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 ABRAXAS2Q15018 415 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 NEDD8Q15843 81 aa9.97□□□□□ -0.81
MCF2-209ENST00000520602 DGKKQ5KSL6 1271 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms