RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PLA2G7Q13093 441 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF234Q14588 700 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 MORF4L2Q15014 288 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 HLFQ16534 295 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 UGCGQ16739 394 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 SHEQ5VZ18 495 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 C11orf87Q6NUJ2 197 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 PLEKHM3Q6ZWE6 761 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 TMPRSS11FQ6ZWK6 438 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 OTOAQ7RTW8 1153 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 FJX1Q86VR8 437 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 CLIP4Q8N3C7 705 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 PGBD5Q8N414 524 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 RBMXL3Q8N7X1 1067 aaKnown RBP5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF611Q8N823 705 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 PPFIBP2Q8ND30 876 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 SPATA22Q8NHS9 363 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 GRAPLQ8TC17 118 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 TMEM255BQ8WV15 326 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 ABTB1Q969K4 478 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 MOB3AQ96BX8 217 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 HMCESQ96FZ2 354 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 CPNE1Q99829 537 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 BTBD10Q9BSF8 475 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 FUT8Q9BYC5 575 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 ERAP1Q9NZ08 941 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 NPAP1Q9NZP6 1156 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 KLHL9Q9P2J3 617 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 C11orf21Q9P2W6 132 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 POLLQ9UGP5 575 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 CPSF3Q9UKF6 684 aaKnown RBP5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 NFS1Q9Y697 457 aa5.11□□□□□ -1.59
HMGB1P46-201ENST00000520062 ELOVL7A1L3X0 281 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 WDR91A4D1P6 747 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 CLEC18AA5D8T8 446 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 TMEM178BH3BS89 294 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 WISP2O76076 250 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 GOSR1O95249 250 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 VIMP08670 466 aaKnown RBP5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 FAM58BPP0C7Q3 252 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 LINC00271P0C7V0 271 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 FAM106CPP0CH98 169 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 CYP11B2P19099 503 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 NR4A2P43354 598 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 C21orf58P58505 322 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 RUNX1T1Q06455 604 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF674Q2M3X9 581 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 TMEM35AQ53FP2 167 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 GRTP1Q5TC63 336 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 LINGO4Q6UY18 593 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 IGSF1Q8N6C5 1336 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF114Q8NC26 417 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 CLEC18CQ8NCF0 446 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 OCC1Q8TAD7 63 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 PTP4A1Q93096 173 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 PHF21AQ96BD5 680 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 HES6Q96HZ4 224 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 LRMDAQ9H2I8 198 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 FN3KQ9H479 309 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 TCP11L1Q9NUJ3 509 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 PADI2Q9Y2J8 665 aa5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P46-201ENST00000520062 IGLV5-37A0A075B6J1 123 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZCWPW2A0A1B0GU75 182 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 A4D1N5 150 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 TRIM64A6NGJ6 449 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 OOEPA6NGQ2 149 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 TRIM64BA6NI03 449 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 PROB1E7EW31 1015 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 MEIS2O14770 477 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 KDM4BO94953 1096 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 BMP10O95393 424 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF23P17027 643 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 POLR2CP19387 275 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 PTPN3P26045 913 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ARRB2P32121 409 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 LHX1P48742 406 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 BRWD1-AS2P59051 145 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 NANOS3P60323 173 aaKnown RBP5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 POLR2LP62875 67 aaKnown RBP5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 EEF1A1P68104 462 aaKnown RBP5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 TRAF3Q13114 568 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 NFE2L1Q14494 772 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 CDO1Q16878 200 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 FAM174BQ3ZCQ3 159 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ANKRD20A4Q4UJ75 823 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ANKRD20A8PQ5CZ79 823 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ANKRD20A2Q5SQ80 823 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ANKRD20A1Q5TYW2 823 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 EEF1A1P5Q5VTE0 462 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ANKRD20A3Q5VUR7 823 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 MFSD12Q6NUT3 480 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 KLC3Q6P597 504 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 KRTAP1-3Q8IUG1 177 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 RDM1Q8NG50 284 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZFAND2BQ8WV99 257 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 OTUB1Q96FW1 271 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 SCMH1Q96GD3 660 aa5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 ZNF385AQ96PM9 386 aaKnown RBP5.09□□□□□ -1.59
HMGB1P46-201ENST00000520062 NEURL2Q9BR09 285 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms