RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SHISA2Q6UWI4 295 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 SHISA6Q6ZSJ9 500 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 TSPAN33Q86UF1 283 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 NLRP14Q86W24 1093 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 MEX3DQ86XN8 651 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 KMT5CQ86Y97 462 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 PLD6Q8N2A8 252 aaKnown RBP6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 GPR150Q8NGU9 434 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM57AQ8TBR7 257 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 SSBP4Q9BWG4 385 aaPredicted RBP6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 TRIM7Q9C029 511 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 ABCG8Q9H221 673 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 MMRN2Q9H8L6 949 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 RMI1Q9H9A7 625 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 TMEM8AQ9HCN3 771 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 CD84Q9UIB8 345 aa6.51□□□□□ -1.37
CTNNA1-216ENST00000519489 GOLGA6CA6NDK9 693 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 GOLGA6BA6NDN3 693 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 SLC9B1P1A6NJY1 282 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 OR5K4A6NMS3 321 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 IDSB3KWA1 339 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 RASGRF2O14827 1237 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 BUB1O43683 1085 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 KDELR3O43731 214 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 HEXIM1O94992 359 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 GOLGA6DP0CG33 693 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 CYP2A7P20853 494 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 IDSP22304 550 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 CASP1P29466 404 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 KRT9P35527 623 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ARL4DP49703 201 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 SNRPFP62306 86 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ALDH6A1Q02252 535 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 PAK1Q13153 545 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ZNF766Q5HY98 468 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 DNTTIP2Q5QJE6 756 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ZNF648Q5T619 568 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 TIGD7Q6NT04 549 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 HIBCHQ6NVY1 386 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 SGMS2Q8NHU3 365 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM222BQ8WU58 562 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ZNF641Q96N77 438 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 NRTNQ99748 197 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 PIP5K1AQ99755 562 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 DPH2Q9BQC3 489 aaPredicted RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 TNMDQ9H2S6 317 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ZNF160Q9HCG1 818 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 ST7Q9NRC1 585 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 POT1Q9NUX5 634 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 GOLGA6AQ9NYA3 693 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM13BQ9NYF5 915 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 DHCR7Q9UBM7 475 aaKnown RBP6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 CDC23Q9UJX2 597 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 WDR37Q9Y2I8 494 aa6.5□□□□□ -1.37
CTNNA1-216ENST00000519489 A0A0G2JNJ9 132 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 SCO2A0A1W2PP80 73 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM72CH0Y354 149 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 TLX2O43763 284 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 DNAJB6O75190 326 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 ZBTB11O95625 1053 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 PRR35P0CG20 571 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 GPR1P46091 355 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 TMPRSS15P98073 1019 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 RAD51Q06609 339 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 SWI5Q1ZZU3 235 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 TUBB8Q3ZCM7 444 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 RAB6CQ53S08 254 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 RILPL1Q5EBL4 403 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM72AQ5TYM5 149 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 MANEALQ5VSG8 457 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 IRAK1BP1Q5VVH5 260 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 RRAGBQ5VZM2 374 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM72DQ6L9T8 149 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 C12orf54Q6X4T0 127 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 TMEM110Q86TL2 294 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 FAM72BQ86X60 149 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 MCATQ8IVS2 390 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 CCDC65Q8IXS2 484 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 GHDCQ8N2G8 530 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 AOPEPQ8N6M6 819 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 KAT5Q92993 513 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 C8orf44Q96CB5 159 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 INTS4Q96HW7 963 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 C1orf74Q96LT6 269 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 CLIC6Q96NY7 704 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 SIGLEC12Q96PQ1 595 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 WDR24Q96S15 920 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 IMPG2Q9BZV3 1241 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 ZYG11BQ9C0D3 744 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 DNAI2Q9GZS0 605 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 RAB6CQ9H0N0 254 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 THAP9Q9H5L6 903 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 KLC4Q9NSK0 619 aa6.49□□□□□ -1.37
CTNNA1-216ENST00000519489 DTLQ9NZJ0 730 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms