RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 FAF2Q96CS3 445 aa18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 ZNF501Q96CX3 271 aaPredicted RBP18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 IMP4Q96G21 291 aaKnown RBP18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 PBKQ96KB5 322 aa18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 CAPZA3Q96KX2 299 aa18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 SMAD5Q99717 465 aaKnown RBP18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 ZCCHC2Q9C0B9 1178 aaKnown RBP18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 C5AR2Q9P296 337 aa18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 RNF14Q9UBS8 474 aa18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 TMPRSS11EQ9UL52 423 aa18.51■□□□□ 0.55
CTNNA1-213ENST00000519113 POP7O75817 140 aaKnown RBP18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 CBX6O95503 412 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 PAFAH1B1P43034 410 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 ITGA1P56199 1179 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 PPIDQ08752 370 aaKnown RBP18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 ZBTB17Q13105 803 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 ZRANB3Q5FWF4 1079 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 PLEKHS1Q5SXH7 462 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 TTC30BQ8N4P2 665 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 PQLC3Q8N755 202 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 ZFPM2Q8WW38 1151 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 SNRNP40Q96DI7 357 aaKnown RBP18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 C19orf60Q96EN9 201 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 GOLPH3Q9H4A6 298 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 FANCEQ9HB96 536 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 SOHLH2Q9NX45 425 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 PACSIN2Q9UNF0 486 aaPredicted RBP18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 PSMD13Q9UNM6 376 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 ALG6Q9Y672 507 aa18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 DNMT3AQ9Y6K1 912 aaPredicted RBP18.5■□□□□ 0.55
CTNNA1-213ENST00000519113 MED13Q9UHV7 2174 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 CES2O00748 559 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 DYNC1I1O14576 645 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 ELOAQ14241 798 aaKnown RBP18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 SLC14A2Q15849 920 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 PCSK7Q16549 785 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 VWA5B1Q5TIE3 1220 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 ZDHHC20Q5W0Z9 365 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 TTC13Q8NBP0 860 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 COG1Q8WTW3 980 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 CLIP3Q96DZ5 547 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 SGSM3Q96HU1 749 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 SLC25A51Q9H1U9 297 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 BPIFA1Q9NP55 256 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 IMP3Q9NV31 184 aaKnown RBP18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 LCMT1Q9UIC8 334 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 BTRCQ9Y297 605 aa18.49■□□□□ 0.55
CTNNA1-213ENST00000519113 MIF4GDA9UHW6 222 aaKnown RBP18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 NDST3O95803 873 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 MTHFD1P11586 935 aaKnown RBP18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 COMTP21964 271 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 TNFRSF8P28908 595 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 CXCR5P32302 372 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 HMGCLP35914 325 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 XRCC4Q13426 336 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 PLEKHN1Q494U1 663 aaPredicted RBP18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 LDLRAP1Q5SW96 308 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 LCN10Q6JVE6 187 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 CREG2Q8IUH2 290 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 ZBTB2Q8N680 514 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 UBL4BQ8N7F7 174 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 BEND7Q8N7W2 519 aaPredicted RBP18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 LRRN4CLQ8ND94 238 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 DTX3LQ8TDB6 740 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 HES6Q96HZ4 224 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 AGAP3Q96P47 875 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 SYTL2Q9HCH5 934 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 ASF1BQ9NVP2 202 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 B3GNT3Q9Y2A9 372 aa18.48■□□□□ 0.55
CTNNA1-213ENST00000519113 OR6C74A6NCV1 312 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 ANKUB1A6NFN9 424 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 AURKAO14965 403 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 SPOPO43791 374 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 RORAP35398 523 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 SLC1A1P43005 524 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 ADCY2Q08462 1091 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 AP1B1Q10567 949 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 NFE2L1Q14494 772 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 ZFYVE27Q5T4F4 411 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 METRNLQ641Q3 311 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 TMEM220Q6QAJ8 160 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 FAM83HQ6ZRV2 1179 aaPredicted RBP18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 RAB43Q86YS6 212 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 SLC34A3Q8N130 599 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 CISD2Q8N5K1 135 aaKnown RBP18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 RASGEF1AQ8N9B8 481 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 TADA1Q96BN2 335 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 CEP41Q9BYV8 373 aa18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 CFAP20Q9Y6A4 193 aaKnown RBP18.47■□□□□ 0.55
CTNNA1-213ENST00000519113 KLHL41O60662 606 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 ALPPP05187 535 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 KPNA2P52292 529 aaKnown RBP18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 CTSCP53634 463 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 PRKAA1Q13131 559 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 RAPSNQ13702 412 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 ATP1A4Q13733 1029 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 TEX35Q5T0J7 233 aa18.46■□□□□ 0.55
CTNNA1-213ENST00000519113 PRAMEF17Q5VTA0 474 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms