RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 PRDX6P30041 224 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 HOXA10P31260 410 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 OTX2P32243 289 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PTGER1P34995 402 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CETN2P41208 172 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 NPBWR1P48145 328 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CYP2J2P51589 502 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 HADHBP55084 474 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC25A3Q00325 362 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 E2F1Q01094 437 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ITGADQ13349 1161 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ARHGAP19Q14CB8 494 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 LARS2Q15031 903 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CARTPTQ16568 116 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PDK4Q16654 411 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PNLIPRP3Q17RR3 467 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 FBXO48Q5FWF7 155 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 METTL11BQ5VVY1 283 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 DCAF12L2Q5VW00 463 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 METRNLQ641Q3 311 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 NANOGNBQ7Z5D8 188 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMCO2Q7Z6W1 182 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PHLDB2Q86SQ0 1253 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 NRROSQ86YC3 692 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ABI1Q8IZP0 508 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CENPLQ8N0S6 344 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 C12orf76Q8N812 135 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 BHLHE23Q8NDY6 225 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR56A1Q8NGH5 318 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR8K3Q8NH51 312 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 WDR20Q8TBZ3 569 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TRPC4APQ8TEL6 797 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATL1Q8WXF7 558 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ERLEC1Q96DZ1 483 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPDL1Q96EA4 605 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 LOXL4Q96JB6 756 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 MUS81Q96NY9 551 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TEFMQ96QE5 360 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PCDHB18PQ96TA0 734 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 SEPHS2Q99611 448 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CPNE1Q99829 537 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 PIGQQ9BRB3 760 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CUEDC2Q9H467 287 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 NSUN3Q9H649 340 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 AGO3Q9H9G7 860 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TBC1D17Q9HA65 648 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAGEF1Q9HAY2 307 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CPNE5Q9HCH3 593 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 VAT1LQ9HCJ6 419 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 EXOC1Q9NV70 894 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ETNK2Q9NVF9 386 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 ASNSD1Q9NWL6 643 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TRNAU1APQ9NX07 287 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 GTSE1Q9NYZ3 720 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 UBAP1Q9NZ09 502 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TFCP2L1Q9NZI6 479 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 STK26Q9P289 416 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 DBNLQ9UJU6 430 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 CHMP2BQ9UQN3 213 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 HBS1LQ9Y450 684 aaKnown RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM184BQ9Y519 407 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAB21L2Q9Y586 359 aa3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 HEMK1Q9Y5R4 338 aaPredicted RBP3.87□□□□□ -1.79
RNU4-60P-201ENST00000517239 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 A0A0U1RQJ8 604 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 A0A1W2PS29 197 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF716A6NP11 495 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 HSPB2A8KAH6 182 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CYR61O00622 381 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRYO14603 147 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 DNALI1O14645 258 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 PTGESO14684 152 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANKRD28O15084 1053 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 LANCL1O43813 399 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 AKAP8O43823 692 aaKnown RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TBX19O60806 448 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATP2C2O75185 946 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 VPS26AO75436 327 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZFPL1O95159 310 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 IGHEP01854 428 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CXCL10P02778 98 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 UGT2B4P06133 528 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 UQCRFS1P1P0C7P4 283 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF735P0CB33 412 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 STAG3L3P0CL85 134 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ETFAP13804 333 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CPA3P15088 417 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 PTBP1P26599 531 aaKnown RBP eCLIP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 NDUFS1P28331 727 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 RGS7P49802 495 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CDR1P51861 262 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CARD18P57730 90 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 IRX4P78413 519 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 NHLH2Q02577 135 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 EGR4Q05215 589 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SREBF2Q12772 1141 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TRDNQ13061 729 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 HSPB2Q16082 182 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms