RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 ALDH9A1P49189 494 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ALDH3A2P51648 485 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 PTGR1Q14914 329 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 SERPINA9Q86WD7 417 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 RBFAQ8N0V3 343 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ZMIZ2Q8NF64 920 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 OR10T2Q8NGX3 314 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ITFG2Q969R8 447 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 IMP4Q96G21 291 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 ANKRD60Q9BZ19 345 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 NUDT4Q9NZJ9 180 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 RPS6KA6Q9UK32 745 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ARVCFO00192 962 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 XYLBO75191 536 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 CYP2A6P11509 494 aaPredicted RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 BMP2P12643 396 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 KRT20P35900 424 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 MAPK8P45983 427 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 MRPL28Q13084 256 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 MED22Q15528 200 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 POM121L1PQ3SYA9 428 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 VARS2Q5ST30 1063 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 FAM219BQ5XKK7 198 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 DOK6Q6PKX4 331 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 RNF19BQ6ZMZ0 732 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 PAQR9Q6ZVX9 377 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 REPS1Q96D71 796 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 AURKBQ96GD4 344 aaPredicted RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 ZFYVE1Q9HBF4 777 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 RAD18Q9NS91 495 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 TRMT13Q9NUP7 481 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 SH3PXD2BA1X283 911 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 CORO1AP31146 461 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 GPC1P35052 558 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 RFC2P35250 354 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ZNF773Q6PK81 442 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 PYCR2Q96C36 320 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 MRM3Q9HC36 420 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 TMEM181Q9P2C4 612 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 GTF2IRD1Q9UHL9 959 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 MAPRE3Q9UPY8 281 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 MAGED1Q9Y5V3 778 aaPredicted RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 CDK5RAP2Q96SN8 1893 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 A0A0U1RQS6 177 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 K7EPI3 171 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 SNPHO15079 494 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 FFAR2O15552 330 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 C8BP07358 591 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ZNF26P17031 533 aaPredicted RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 TPTEP56180 551 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 POLR2LP62875 67 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 TXNL4AP83876 142 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 SMAD3P84022 425 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 ABRQ12979 859 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 MOGQ16653 247 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 XKR6Q5GH73 641 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 SPANXN4Q5MJ08 99 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 BLOC1S3Q6QNY0 202 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 CHERPQ8IWX8 916 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 TMEM199Q8N511 208 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 NELL1Q92832 810 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 NSUN3Q9H649 340 aaKnown RBP10.07□□□□□ -0.8
SMG7-215ENST00000515829 RNF11Q9Y3C5 154 aa10.07□□□□□ -0.8
SMG7-215ENST00000515829 ACOT8O14734 319 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 ACSL4O60488 711 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 SCELO95171 688 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 PGLSO95336 258 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 ALPIP09923 528 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 IGFBP6P24592 240 aaPredicted RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 APLP1P51693 650 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 ZNF33AQ06730 810 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 TAF1AQ15573 450 aaPredicted RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 NPTX1Q15818 432 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 ZBTB6Q15916 424 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 ARMCX4Q5H9R4 360 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 UBE2R2Q712K3 238 aaPredicted RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 RETREG3Q86VR2 466 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 TTC29Q8NA56 475 aaPredicted RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 BRI3BPQ8WY22 251 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 TFAP2CQ92754 450 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 IGSF8Q969P0 613 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 NAA50Q9GZZ1 169 aaKnown RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 ZDHHC6Q9H6R6 413 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 GKN1Q9NS71 199 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 SAMD4AQ9UPU9 718 aaKnown RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 DNAJC25-GNG10A0A024R161 153 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 A0A1B0GW55 424 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 IFRD1O00458 451 aaPredicted RBP10.06□□□□□ -0.8
SMG7-215ENST00000515829 DYRK3O43781 588 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 DFNA5O60443 496 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 UGT2B11O75310 529 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 CLPXO76031 633 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 DUX4L2P0CJ85 424 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 DUX4L3P0CJ86 424 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 DUX4L4P0CJ87 422 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 DUX4L5P0CJ88 424 aa10.06□□□□□ -0.8
SMG7-215ENST00000515829 DUX4L6P0CJ89 424 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms