RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 FAM237AA0A1B0GTK4 181 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 hCG_1809904A0A1W2PP81 198 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 A0A1W2PPE2 198 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 A0A1W2PR64 198 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 OR2A25A4D2G3 310 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SERINC4A6NH21 518 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 ERI2A8K979 691 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 WDR46O15213 610 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 LMX1BO60663 402 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 NDUFS3O75489 264 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SLU7O95391 586 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 EGFP01133 1207 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SERPINB2P05120 415 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 ATP5BP06576 529 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 ABCB1P08183 1280 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 CDH1P12830 882 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SELLP14151 372 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 STMN1P16949 149 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CORO1AP31146 461 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 GP5P40197 560 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 LIG4P49917 911 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 STAT2P52630 851 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 MFAP4P55083 255 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 EEF1A1P68104 462 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 MRPS34P82930 218 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 PPP2R5CQ13362 524 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SMC1AQ14683 1233 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 MYLK3Q32MK0 819 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CRY2Q49AN0 593 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 DCST1Q5T197 706 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 EEF1A1P5Q5VTE0 462 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 ZNF772Q68DY9 489 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 DUS1LQ6P1R4 473 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 PAPD4Q6PIY7 484 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 DCLRE1AQ6PJP8 1040 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 TSSK4Q6SA08 328 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PET117Q6UWS5 81 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 GLDNQ6ZMI3 551 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 ZNF704Q6ZNC4 412 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 SEPT14Q6ZU15 432 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 RAPH1Q70E73 1250 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 NFE4Q86UQ8 179 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 HAPLN4Q86UW8 402 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 LINC00346Q8IVM7 164 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 UNC45BQ8IWX7 931 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 ODF3L1Q8IXM7 274 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 RNF168Q8IYW5 571 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 ZNF34Q8IZ26 560 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 IL17RCQ8NAC3 791 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SLC20A1Q8WUM9 679 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 RSPH1Q8WYR4 309 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CD101Q93033 1021 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PIGTQ969N2 578 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CCDC47Q96A33 483 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 RHBDF1Q96CC6 855 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 GRAMD2BQ96HH9 432 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CFAP57Q96MR6 1250 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SPAG5Q96R06 1193 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 ABHD1Q96SE0 405 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 EPYCQ99645 322 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SYT17Q9BSW7 474 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 DESI2Q9BSY9 194 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 LRRC1Q9BTT6 524 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 KLHL4Q9C0H6 718 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 CSTL1Q9H114 145 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PDZD7Q9H5P4 517 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 POLR1BQ9H9Y6 1135 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 SEBOXQ9HB31 216 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 ANAPC2Q9UJX6 822 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PADI1Q9ULC6 663 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 ISY1Q9ULR0 285 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 PPIEQ9UNP9 301 aaKnown RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 KNSTRNQ9Y448 316 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 TMEM184BQ9Y519 407 aaPredicted RBP3.11□□□□□ -1.91
HERC4-215ENST00000515753 TRPV2Q9Y5S1 764 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 MAU2Q9Y6X3 613 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 PTPRCP08575 1304 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 KANK1Q14678 1352 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 GPRASP1Q5JY77 1395 aa3.11□□□□□ -1.91
HERC4-215ENST00000515753 FAM135BQ49AJ0 1406 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 MBD5Q9P267 1494 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TCRBV21S2A2A0A5A6 115 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 KANSL1LA0AUZ9 987 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CTAGE9A4FU28 777 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 FAM90A26D6RGX4 464 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 P2RY10O00398 339 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 KCNN4O15554 427 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 HS6ST1O60243 411 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 JRKO75564 520 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 CTAGE8P0CG41 777 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 MYOD1P15172 320 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 ZNF23P17027 643 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TMEM11P17152 192 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 ITGA2P17301 1181 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 UGT1A1P22309 533 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 TCF7P36402 384 aaPredicted RBP3.1□□□□□ -1.91
HERC4-215ENST00000515753 ATP6V1E1P36543 226 aa3.1□□□□□ -1.91
HERC4-215ENST00000515753 HNF4AP41235 474 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms