RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PIDD1Q9HB75 910 aa14.6□□□□□ -0.07
NUP54-217ENST00000514987 ELOVL2Q9NXB9 296 aa14.6□□□□□ -0.07
NUP54-217ENST00000514987 SLC25A13Q9UJS0 675 aa14.6□□□□□ -0.07
NUP54-217ENST00000514987 ARHGAP10A1A4S6 786 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 LEFTY2O00292 366 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 INPP4BO15327 924 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 TGM5O43548 720 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 H6PDO95479 791 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 GUCA1CO95843 209 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 ANXA5P08758 320 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 OR56A5P0C7T3 313 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 G6PDP11413 515 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 EPB42P16452 691 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 UGT1A6P19224 532 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 UGT1A1P22309 533 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 UGT1A4P22310 534 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 VARSP26640 1264 aaKnown RBP14.59□□□□□ -0.07
NUP54-217ENST00000514987 CALRP27797 417 aaKnown RBP14.59□□□□□ -0.07
NUP54-217ENST00000514987 IL12AP29459 219 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 AKT1P31749 480 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 UGT1A3P35503 534 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 UGT1A5P35504 534 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 CASP2P42575 452 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 HTR6P50406 440 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 APLP1P51693 650 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 POLR2LP62875 67 aaKnown RBP14.59□□□□□ -0.07
NUP54-217ENST00000514987 RABL3Q5HYI8 236 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 CACHD1Q5VU97 1274 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
NUP54-217ENST00000514987 C22orf39Q6P5X5 142 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 BORAQ6PGQ7 559 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 IYDQ6PHW0 289 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 FKBP9P1Q75LS8 142 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 SPRED1Q7Z699 444 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 CLDN19Q8N6F1 224 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 HM13Q8TCT9 377 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 LKAAEAR1Q8TD35 194 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 VWCEQ96DN2 955 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 LMLNQ96KR4 655 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 MAGEB10Q96LZ2 347 aaPredicted RBP14.59□□□□□ -0.07
NUP54-217ENST00000514987 PRPF18Q99633 342 aaKnown RBP14.59□□□□□ -0.07
NUP54-217ENST00000514987 SLC29A1Q99808 456 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 SH3GL1Q99961 368 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 ZBP1Q9H171 429 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 TNKS2Q9H2K2 1166 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 MYRFQ9Y2G1 1151 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 CCL27Q9Y4X3 112 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 PRSS21Q9Y6M0 314 aa14.59□□□□□ -0.07
NUP54-217ENST00000514987 TCRBV5S2A0A599 114 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 NPIPB15A6NHN6 443 aaPredicted RBP14.58□□□□□ -0.08
NUP54-217ENST00000514987 ANKRD28O15084 1053 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 KPNA5O15131 536 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 ULK1O75385 1050 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 TULP3O75386 442 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 GMNNO75496 209 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 STK16O75716 305 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 KCNH1O95259 989 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 PGM3O95394 542 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 KRT6AP02538 564 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 KRT6BP04259 564 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 IL6P05231 212 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 ADH1AP07327 375 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 C8GP07360 202 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 CNPP09543 421 aaKnown RBP14.58□□□□□ -0.08
NUP54-217ENST00000514987 SLC2A4P14672 509 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 HOXB6P17509 224 aaKnown RBP14.58□□□□□ -0.08
NUP54-217ENST00000514987 ITGB6P18564 788 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 DDX6P26196 483 aaKnown RBP eCLIP14.58□□□□□ -0.08
NUP54-217ENST00000514987 GGT5P36269 586 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 GNPDA1P46926 289 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 KRT6CP48668 564 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 CCT8P50990 548 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 TUBA4AP68366 448 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 DEFB103AP81534 67 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 DMC1Q14565 340 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 ABRAXAS2Q15018 415 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 ATP6AP1Q15904 470 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 FUT11Q495W5 492 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 NHSL2Q5HYW2 709 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 FAM117BQ6P1L5 589 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 LILRA6Q6PI73 481 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 SATL1Q86VE3 508 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 PLPP6Q8IY26 295 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 TFAP2CQ92754 450 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 APOL5Q9BWW9 433 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 CD320Q9NPF0 282 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 GMPR2Q9P2T1 348 aaKnown RBP14.58□□□□□ -0.08
NUP54-217ENST00000514987 INTS6Q9UL03 887 aaKnown RBP14.58□□□□□ -0.08
NUP54-217ENST00000514987 RNF11Q9Y3C5 154 aa14.58□□□□□ -0.08
NUP54-217ENST00000514987 IGLV3-16A0A075B6K0 115 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 PABPN1LA6NDY0 278 aaKnown RBP14.57□□□□□ -0.08
NUP54-217ENST00000514987 SLC16A5O15375 505 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 RASAL1O95294 804 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 LDLRP01130 860 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 CLTBP09497 229 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 SPATA31D3P0C874 917 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 MPC1LP0DKB6 136 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 CHRM1P11229 460 aaPredicted RBP14.57□□□□□ -0.08
NUP54-217ENST00000514987 NFKBIAP25963 317 aa14.57□□□□□ -0.08
NUP54-217ENST00000514987 HNMTP50135 292 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms