RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SLC25A41Q8N5S1 370 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ZSCAN1Q8NBB4 408 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 COLGALT1Q8NBJ5 622 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PDCD6IPQ8WUM4 868 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 HEXDCQ8WVB3 486 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 WNT8BQ93098 351 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 P2RY11Q96G91 374 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 C1orf50Q9BV19 199 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 BRINP2Q9C0B6 783 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PPA2Q9H2U2 334 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 EIF2B3Q9NR50 452 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PLSCR3Q9NRY6 295 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 IPO11Q9UI26 975 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PMF1-BGLAPU3KQ54 211 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ACOD1A6NK06 481 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 HHLA1C9JL84 531 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PPM1BO75688 479 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TRIM16O95361 564 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 MLNP12872 115 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TGM1P22735 817 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 GRIK1P39086 918 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PIK3CBP42338 1070 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PURAQ00577 322 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 OLIG2Q13516 323 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TUSC1Q2TAM9 212 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 RAB41Q5JT25 222 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ANKRD26P1Q6NSI1 321 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 KIAA1324Q6UXG2 1013 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TIFABQ6ZNK6 161 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PLEKHG7Q6ZR37 379 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF567Q8N184 647 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF321PQ8N8H1 164 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PGLYRP2Q96PD5 576 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SMOQ99835 787 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TUBB6Q9BUF5 446 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 KIFC1Q9BW19 673 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 AP5M1Q9H0R1 490 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ELAC1Q9H777 363 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 RC3H2Q9HBD1 1191 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PCDHB16Q9NRJ7 776 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 MIOSQ9NXC5 875 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 THUMPD1Q9NXG2 353 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TLK1Q9UKI8 766 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 EMCNQ9ULC0 261 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 C17orf102A2RUQ5 167 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CCDC85CA6NKD9 419 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 YJEFN3A6XGL0 299 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 LEUTXA8MZ59 168 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 M0QYT0 321 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SGCEO43556 437 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SNNO75324 88 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 DHFRP00374 187 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ALDOAP04075 364 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PRKCGP05129 697 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ANXA8P13928 327 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 RAB3AP20336 220 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PIK3R1P27986 724 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PSMB4P28070 264 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CPT1AP50416 773 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SELPLGQ14242 412 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 SSX2Q16385 188 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 USP41Q3LFD5 358 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 FGD3Q5JSP0 725 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ANXA8L1Q5VT79 327 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ALYREFQ86V81 257 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 C7orf61Q8IZ16 206 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 HIPK4Q8NE63 616 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PYDC1Q8WXC3 89 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 APBB2Q92870 758 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ZNF845Q96IR2 970 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 ABCG8Q9H221 673 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 TOR3AQ9H497 397 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PRDM9Q9NQV7 894 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PKD2L2Q9NZM6 624 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 CDC14AQ9UNH5 594 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 AP4B1Q9Y6B7 739 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 PLXNA3P51805 1871 aa7.37□□□□□ -1.23
PDLIM5-219ENST00000514743 E2F8A0AVK6 867 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CTDSP2O14595 271 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 TERTO14746 1132 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 RGS5O15539 181 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 FZD6O60353 706 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 RFPL2O75678 378 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 EPOP01588 193 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CRHR1P34998 444 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ADH7P40394 386 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ARL4AP40617 200 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DGKQP52824 942 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DAOAP59103 153 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CREMQ03060 361 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 BST1Q10588 318 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SCAPQ12770 1279 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 GK3PQ14409 553 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 PDK1Q15118 436 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 DGKKQ5KSL6 1271 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 MROH9Q5TGP6 573 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 ERICH5Q6P6B1 374 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 SLC22A16Q86VW1 577 aa7.36□□□□□ -1.23
PDLIM5-219ENST00000514743 CYP4Z2PQ8N1L4 340 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms