RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 PRAMEF17Q5VTA0 474 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 ITPRIPL1Q6GPH6 555 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 LCN10Q6JVE6 187 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 OR8K5Q8NH50 307 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 ACTL9Q8TC94 416 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 CCM2Q9BSQ5 444 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 CHST8Q9H2A9 424 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 CRLS1Q9UJA2 301 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 BTRCQ9Y297 605 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 PCDHA13Q9Y5I0 950 aa13.03□□□□□ -0.32
POLR2J3-217ENST00000513438 TEX15Q9BXT5 2789 aa13.02□□□□□ -0.32
POLR2J3-217ENST00000513438 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 LCA5LO95447 670 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 CRTAMO95727 393 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 RALBP11234 206 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 PSMB4P28070 264 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 COPS2P61201 443 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 OTUD4Q01804 1114 aaKnown RBP13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 PRKAA1Q13131 559 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 IL10RAQ13651 578 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 PLEKHS1Q5SXH7 462 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 CPZQ66K79 652 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 CARFQ8N187 725 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 HM13Q8TCT9 377 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 PSMG3-AS1Q96PY0 264 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 SLC25A23Q9BV35 468 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 TLR10Q9BXR5 811 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 ACSS2Q9NR19 701 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 LATS2Q9NRM7 1088 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 HEBP2Q9Y5Z4 205 aa13.02□□□□□ -0.33
POLR2J3-217ENST00000513438 C17orf113A0A1B0GUU1 675 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 MEN1O00255 615 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 KCNN4O15554 427 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 RBP3P10745 1247 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 ATP1B2P14415 290 aaPredicted RBP13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 PRDX3P30048 256 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 PRLHRP49683 370 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 GSDMDP57764 484 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 EIF3EP60228 445 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 IZUMO3Q5VZ72 239 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 DENND5AQ6IQ26 1287 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 DARS2Q6PI48 645 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 SNX20Q7Z614 316 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 DSELQ8IZU8 1212 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 NXPE1Q8N323 547 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 LCN9Q8WX39 176 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 CPT1BQ92523 772 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 ULK4Q96C45 1275 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 LRFN5Q96NI6 719 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 COPS8Q99627 209 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 NRTNQ99748 197 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 FAM118BQ9BPY3 351 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 ING2Q9H160 280 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 SRMSQ9H3Y6 488 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 MLXIPLQ9NP71 852 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
POLR2J3-217ENST00000513438 SEC16AO15027 2179 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 MACROD2A1Z1Q3 448 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 GSAPA4D1B5 854 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 CFAP99D6REC4 459 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 BTN3A3O00478 584 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 CCL22O00626 93 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 VPS4BO75351 444 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 STK10O94804 968 aaKnown RBP13□□□□□ -0.33
POLR2J3-217ENST00000513438 RAB40ALP0C0E4 278 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 ITGALP20701 1170 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 CTNNA2P26232 953 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 PDHA2P29803 388 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 HADHAP40939 763 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 PTGIRP43119 386 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 PREPP48147 710 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 CDKN1CP49918 316 aaPredicted RBP13□□□□□ -0.33
POLR2J3-217ENST00000513438 PGDP52209 483 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 ABRQ12979 859 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 SPA17Q15506 151 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 NADK2Q4G0N4 442 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 FAM69BQ5VUD6 431 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 MICALCLQ6ZW33 695 aa13□□□□□ -0.33
POLR2J3-217ENST00000513438 CDKL3Q8IVW4 592 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms