RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 TRPT1Q86TN4 253 aaKnown RBP4.98□□□□□ -1.61
CHD1-209ENST00000512844 LDB1Q86U70 411 aaPredicted RBP4.98□□□□□ -1.61
CHD1-209ENST00000512844 KBTBD6Q86V97 674 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 NME8Q8N427 588 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 FBXO39Q8N4B4 442 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 PAPD5Q8NDF8 572 aaKnown RBP4.98□□□□□ -1.61
CHD1-209ENST00000512844 OR2T12Q8NG77 320 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 WDR20Q8TBZ3 569 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 TMEM143Q96AN5 459 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 F2RL3Q96RI0 385 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 SLC22A12Q96S37 553 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 NUDT16L1Q9BRJ7 211 aaKnown RBP4.98□□□□□ -1.61
CHD1-209ENST00000512844 TRAF4Q9BUZ4 470 aaPredicted RBP4.98□□□□□ -1.61
CHD1-209ENST00000512844 FNDC11Q9BVV2 318 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 MMP27Q9H306 513 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 SLA2Q9H6Q3 261 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 ADPRHL2Q9NX46 363 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 COQ3Q9NZJ6 369 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 CHORDC1Q9UHD1 332 aaPredicted RBP4.98□□□□□ -1.61
CHD1-209ENST00000512844 ACAD8Q9UKU7 415 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 PCDHGB4Q9UN71 923 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 GAB2Q9UQC2 676 aa4.98□□□□□ -1.61
CHD1-209ENST00000512844 PRSS51A0A1B0GVH4 220 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 A0A1W2PRB8 838 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 PRSS47A8MTI9 375 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 ERVV-2B6SEH9 535 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 PAPSS1O43252 624 aaPredicted RBP4.97□□□□□ -1.61
CHD1-209ENST00000512844 GCNT3O95395 438 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 TPOP07202 933 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 IGHV4-38-2P0DP08 117 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 CHRNB4P30926 498 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 CDH11P55287 796 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 STK4Q13043 487 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 KRTAP24-1Q3LI83 254 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 ZC2HC1CQ53FD0 456 aaPredicted RBP4.97□□□□□ -1.61
CHD1-209ENST00000512844 ADAM5Q6NVV9 412 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 ANO5Q75V66 913 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 ISCA2Q86U28 154 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 AACSQ86V21 672 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 PLD3Q8IV08 490 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 DNAJC22Q8N4W6 341 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 ZNF248Q8NDW4 579 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 PRPF31Q8WWY3 499 aaKnown RBP4.97□□□□□ -1.61
CHD1-209ENST00000512844 ZNF524Q96C55 264 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 NEK1Q96PY6 1258 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 OR6C1Q96RD1 312 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 CDRT15Q96T59 188 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 FSD1Q9BTV5 496 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 MRPL1Q9BYD6 325 aaKnown RBP4.97□□□□□ -1.61
CHD1-209ENST00000512844 BARHL1Q9BZE3 327 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 NPAP1Q9NZP6 1156 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 SWAP70Q9UH65 585 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 RABGAP1Q9Y3P9 1069 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 SNX8Q9Y5X2 465 aa4.97□□□□□ -1.61
CHD1-209ENST00000512844 PLOD2O00469 737 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 EDIL3O43854 480 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 PLA2G4BP0C869 781 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 THOP1P52888 689 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 PRKAA1Q13131 559 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 RBM39Q14498 530 aaKnown RBP4.96□□□□□ -1.62
CHD1-209ENST00000512844 CEP85LQ5SZL2 805 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 ZNF449Q6P9G9 518 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 SH2D5Q6ZV89 423 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 ZNF554Q86TJ5 538 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 KLHDC8BQ8IXV7 354 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 CRYBG2Q8N1P7 616 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 FAM76AQ8TAV0 307 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 MYADMQ96S97 322 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 ABHD6Q9BV23 337 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 SLC52A3Q9NQ40 469 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 RPS6KA6Q9UK32 745 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 FLT1P17948 1338 aa4.96□□□□□ -1.62
CHD1-209ENST00000512844 TEX13DA0A0J9YY54 714 aaPredicted RBP4.95□□□□□ -1.62
CHD1-209ENST00000512844 MAGEB17A8MXT2 336 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 TO15178 435 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 STARD3NLO95772 234 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 RNF224P0DH78 156 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 LIFP15018 202 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 ACTN2P35609 894 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 GLIPR1P48060 266 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 PDX1P52945 283 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 CDK3Q00526 305 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 CFAP58Q5T655 872 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 CORO6Q6QEF8 472 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 TMEM173Q86WV6 379 aaPredicted RBP4.95□□□□□ -1.62
CHD1-209ENST00000512844 DNAAF5Q86Y56 855 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 LPGAT1Q92604 370 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 ZNF501Q96CX3 271 aaPredicted RBP4.95□□□□□ -1.62
CHD1-209ENST00000512844 SGK494Q96LW2 274 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 SCRT2Q9NQ03 307 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.95□□□□□ -1.62
CHD1-209ENST00000512844 MBNL1Q9NR56 388 aaKnown RBP4.95□□□□□ -1.62
CHD1-209ENST00000512844 DDX43Q9NXZ2 648 aaKnown RBP4.95□□□□□ -1.62
CHD1-209ENST00000512844 WDR81Q562E7 1941 aa4.95□□□□□ -1.62
CHD1-209ENST00000512844 PRR32B1ATL7 298 aa4.94□□□□□ -1.62
CHD1-209ENST00000512844 XRCC3O43542 346 aa4.94□□□□□ -1.62
CHD1-209ENST00000512844 GJB3O75712 270 aa4.94□□□□□ -1.62
CHD1-209ENST00000512844 BEST1O76090 585 aa4.94□□□□□ -1.62
CHD1-209ENST00000512844 BCL10O95999 233 aa4.94□□□□□ -1.62
CHD1-209ENST00000512844 AMBPP02760 352 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms