RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GPR137CQ8N3F9 429 aa8.81□□□□□ -1
VCAN-208ENST00000512590 METTL27Q8N6F8 245 aaPredicted RBP8.81□□□□□ -1
VCAN-208ENST00000512590 PROKR2Q8NFJ6 384 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SAT2Q96F10 170 aaPredicted RBP8.81□□□□□ -1
VCAN-208ENST00000512590 MAGEB18Q96M61 343 aa8.81□□□□□ -1
VCAN-208ENST00000512590 C8orf33Q9H7E9 229 aaPredicted RBP8.81□□□□□ -1
VCAN-208ENST00000512590 KLC4Q9NSK0 619 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CFAP74Q9C0B2 1584 aa8.81□□□□□ -1
VCAN-208ENST00000512590 A0A1W2PQH9 124 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TREHO43280 583 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SNCGO76070 127 aa8.81□□□□□ -1
VCAN-208ENST00000512590 MSL3P1P0C860 447 aa8.81□□□□□ -1
VCAN-208ENST00000512590 BCKDHAP12694 445 aa8.81□□□□□ -1
VCAN-208ENST00000512590 TMEM11P17152 192 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SMPD1P17405 629 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CPOXP36551 454 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CCNFP41002 786 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ABATP80404 500 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ITGB3BPQ13352 177 aaPredicted RBP8.81□□□□□ -1
VCAN-208ENST00000512590 FAM110CQ1W6H9 321 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SWT1Q5T5J6 900 aaKnown RBP8.81□□□□□ -1
VCAN-208ENST00000512590 GJD3Q8N144 294 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ASB15Q8WXK1 588 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CPT1BQ92523 772 aa8.81□□□□□ -1
VCAN-208ENST00000512590 MYDGFQ969H8 173 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CRNNQ9UBG3 495 aaPredicted RBP8.81□□□□□ -1
VCAN-208ENST00000512590 HMGXB4Q9UGU5 601 aa8.81□□□□□ -1
VCAN-208ENST00000512590 ZFR2Q9UPR6 939 aaKnown RBP8.81□□□□□ -1
VCAN-208ENST00000512590 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
VCAN-208ENST00000512590 HAT1O14929 419 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CAMTA2O94983 1202 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GGT2P36268 569 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PREPP48147 710 aa8.81□□□□□ -1
VCAN-208ENST00000512590 HSPB3Q12988 150 aa8.81□□□□□ -1
VCAN-208ENST00000512590 MELKQ14680 651 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SH3PXD2AQ5TCZ1 1133 aa8.81□□□□□ -1
VCAN-208ENST00000512590 IZUMO2Q6UXV1 221 aa8.81□□□□□ -1
VCAN-208ENST00000512590 SH3RF2Q8TEC5 729 aa8.81□□□□□ -1
VCAN-208ENST00000512590 PIH1D2Q8WWB5 315 aa8.81□□□□□ -1
VCAN-208ENST00000512590 GNB4Q9HAV0 340 aa8.81□□□□□ -1
VCAN-208ENST00000512590 CLN5O75503 358 aa8.8□□□□□ -1
VCAN-208ENST00000512590 AHSA1O95433 338 aa8.8□□□□□ -1
VCAN-208ENST00000512590 SGPL1O95470 568 aa8.8□□□□□ -1
VCAN-208ENST00000512590 NAA20P61599 178 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TXNL4AP83876 142 aaKnown RBP8.8□□□□□ -1
VCAN-208ENST00000512590 CCZ1BP86790 482 aa8.8□□□□□ -1
VCAN-208ENST00000512590 CCZ1P86791 482 aaPredicted RBP8.8□□□□□ -1
VCAN-208ENST00000512590 FMO1Q01740 532 aa8.8□□□□□ -1
VCAN-208ENST00000512590 LACTB2Q53H82 288 aaPredicted RBP8.8□□□□□ -1
VCAN-208ENST00000512590 PCID2Q5JVF3 399 aa8.8□□□□□ -1
VCAN-208ENST00000512590 IDNKQ5T6J7 187 aa8.8□□□□□ -1
VCAN-208ENST00000512590 DPY19L4Q7Z388 723 aa8.8□□□□□ -1
VCAN-208ENST00000512590 S100A7AQ86SG5 101 aa8.8□□□□□ -1
VCAN-208ENST00000512590 FTMTQ8N4E7 242 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ZBTB2Q8N680 514 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ORAI3Q9BRQ5 295 aa8.8□□□□□ -1
VCAN-208ENST00000512590 NMUR1Q9HB89 426 aa8.8□□□□□ -1
VCAN-208ENST00000512590 DNAAF2Q9NVR5 837 aaKnown RBP8.8□□□□□ -1
VCAN-208ENST00000512590 TAS2R14Q9NYV8 317 aa8.8□□□□□ -1
VCAN-208ENST00000512590 EDDM13A0A1B0GTR0 161 aa8.8□□□□□ -1
VCAN-208ENST00000512590 CDC14CA4D256 554 aa8.8□□□□□ -1
VCAN-208ENST00000512590 FAM205CA6NFA0 338 aa8.8□□□□□ -1
VCAN-208ENST00000512590 PTGES3LE9PB15 166 aa8.8□□□□□ -1
VCAN-208ENST00000512590 M0R2N6 131 aa8.8□□□□□ -1
VCAN-208ENST00000512590 RAB36O95755 333 aa8.8□□□□□ -1
VCAN-208ENST00000512590 LTA4HP09960 611 aaKnown RBP8.8□□□□□ -1
VCAN-208ENST00000512590 ALADP13716 330 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TTKP33981 857 aa8.8□□□□□ -1
VCAN-208ENST00000512590 DSG1Q02413 1049 aa8.8□□□□□ -1
VCAN-208ENST00000512590 DLX2Q07687 328 aaPredicted RBP8.8□□□□□ -1
VCAN-208ENST00000512590 RIPK1Q13546 671 aa8.8□□□□□ -1
VCAN-208ENST00000512590 KCTD18Q6PI47 426 aaPredicted RBP8.8□□□□□ -1
VCAN-208ENST00000512590 PAQR7Q86WK9 346 aa8.8□□□□□ -1
VCAN-208ENST00000512590 SLC43A2Q8N370 569 aa8.8□□□□□ -1
VCAN-208ENST00000512590 OR13C3Q8NGS6 347 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TTYH3Q9C0H2 523 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TMEM168Q9H0V1 697 aa8.8□□□□□ -1
VCAN-208ENST00000512590 ARNT2Q9HBZ2 717 aa8.8□□□□□ -1
VCAN-208ENST00000512590 AGPAT3Q9NRZ7 376 aa8.8□□□□□ -1
VCAN-208ENST00000512590 PFDN2Q9UHV9 154 aa8.8□□□□□ -1
VCAN-208ENST00000512590 CAMK2AQ9UQM7 478 aa8.8□□□□□ -1
VCAN-208ENST00000512590 MAGEA13PA6NCF6 341 aa8.8□□□□□ -1
VCAN-208ENST00000512590 KDM4BO94953 1096 aa8.8□□□□□ -1
VCAN-208ENST00000512590 PIRTP0C851 137 aa8.8□□□□□ -1
VCAN-208ENST00000512590 RAC2P15153 192 aa8.8□□□□□ -1
VCAN-208ENST00000512590 IL7RP16871 459 aa8.8□□□□□ -1
VCAN-208ENST00000512590 GNRHRP30968 328 aa8.8□□□□□ -1
VCAN-208ENST00000512590 KHKP50053 298 aa8.8□□□□□ -1
VCAN-208ENST00000512590 OR4D2P58180 307 aa8.8□□□□□ -1
VCAN-208ENST00000512590 C4orf19Q8IY42 314 aa8.8□□□□□ -1
VCAN-208ENST00000512590 SPERTQ8NA61 448 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TLR10Q9BXR5 811 aa8.8□□□□□ -1
VCAN-208ENST00000512590 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
VCAN-208ENST00000512590 OR2AG1Q9H205 316 aa8.8□□□□□ -1
VCAN-208ENST00000512590 TCF7L1Q9HCS4 588 aa8.8□□□□□ -1
VCAN-208ENST00000512590 AK9Q5TCS8 1911 aa8.8□□□□□ -1
VCAN-208ENST00000512590 hCG_1809904A0A1W2PP81 198 aa8.8□□□□□ -1
VCAN-208ENST00000512590 A0A1W2PPE2 198 aa8.8□□□□□ -1
VCAN-208ENST00000512590 A0A1W2PR64 198 aa8.8□□□□□ -1
VCAN-208ENST00000512590 A0A1W2PRU2 124 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms