RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CCL7P80098 99 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 EIF3IQ13347 325 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 ELAVL3Q14576 367 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 DLG2Q15700 870 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF284Q2VY69 593 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 ACCSLQ4AC99 568 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 AARS2Q5JTZ9 985 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 RNF187Q5TA31 235 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CES3Q6UWW8 571 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 ABI3BPQ7Z7G0 1075 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 RBFAQ8N0V3 343 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 OR2A12Q8NGT7 310 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 WDR48Q8TAF3 677 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 NAT6Q93015 286 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 FAM131CQ96AQ9 280 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 SCRN2Q96FV2 425 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CHMP6Q96FZ7 201 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CDKN2AIPNLQ96HQ2 116 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 EXOC2Q96KP1 924 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 BMFQ96LC9 184 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 GFM1Q96RP9 751 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 AGAP2Q99490 1192 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CDH19Q9H159 772 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 SUV39H2Q9H5I1 410 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 UGT1A7Q9HAW7 530 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 UGT1A10Q9HAW8 530 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 UGT1A8Q9HAW9 530 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 IARS2Q9NSE4 1012 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 GULP1Q9UBP9 304 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 SLC2A6Q9UGQ3 507 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 TUBD1Q9UJT1 453 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 GRID1Q9ULK0 1009 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 PADI4Q9UM07 663 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 PCDHGC4Q9Y5F7 938 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 COMMD10Q9Y6G5 202 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 CSNK1G3Q9Y6M4 447 aa10.33□□□□□ -0.76
PDLIM5-217ENST00000512274 MED13Q9UHV7 2174 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF106Q9H2Y7 1883 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 RGSL1A5PLK6 1076 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 PFDN6O15212 129 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 VPS4BO75351 444 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 WISP3O95389 354 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 S1PR4O95977 384 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 CSF2P04141 144 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 APOA4P06727 396 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF30P17039 623 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 FOXN2P32314 431 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 RPA3P35244 121 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 SLC1A2P43004 574 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 RPIAP49247 311 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ARSDP51689 593 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 CCNHP51946 323 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 STC1P52823 247 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 SEPT6Q14141 434 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 GALNT3Q14435 633 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 CCDC153Q494R4 210 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 MROH9Q5TGP6 573 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 FAM46CQ5VWP2 391 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF470Q6ECI4 717 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 CERS6Q6ZMG9 384 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 GLT6D1Q7Z4J2 308 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 HORMAD1Q86X24 394 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 DTX1Q86Y01 620 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 TRIM42Q8IWZ5 723 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 C4orf33Q8N1A6 199 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 SDR16C5Q8N3Y7 309 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 LPCAT1Q8NF37 534 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 OR4L1Q8NH43 312 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 BLOC1S5Q8TDH9 187 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 TCP10LQ8TDR4 215 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 OR8D1Q8WZ84 308 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 GLMNQ92990 594 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 HDAC10Q969S8 669 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 TSPAN17Q96FV3 270 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ABHD17AQ96GS6 310 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 HEPHQ9BQS7 1158 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 BOCQ9BWV1 1114 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 TNKS2Q9H2K2 1166 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 TCEAL2Q9H3H9 227 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 KCNK9Q9NPC2 374 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 SNX15Q9NRS6 342 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 SIRPGQ9P1W8 387 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 MID2Q9UJV3 735 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 VPS4AQ9UN37 437 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ZFR2Q9UPR6 939 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ZNF711Q9Y462 761 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 SPO11Q9Y5K1 396 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 ARL5AQ9Y689 179 aa10.32□□□□□ -0.76
PDLIM5-217ENST00000512274 TRPM6Q9BX84 2022 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 NBASA2RRP1 2371 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 SDK2Q58EX2 2172 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 TRBV5-4A0A0C4DH59 114 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 SPTY2D1-AS1A0A0U1RR47 76 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 TTC24A2A3L6 582 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 C9orf172C9J069 976 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 D6RAR5 112 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 C1QTNF3-AMACRE9PGA6 284 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 TPP1O14773 563 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 PIAS1O75925 651 aa10.31□□□□□ -0.76
PDLIM5-217ENST00000512274 RPLP0P05388 317 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms