RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 DHX34Q14147 1143 aaKnown RBP11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 MSS51Q4VC12 460 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 IZUMO3Q5VZ72 239 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 HIBCHQ6NVY1 386 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 NEPROQ6NW34 567 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 DUS1LQ6P1R4 473 aaKnown RBP11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 ZNF572Q7Z3I7 529 aaPredicted RBP11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 PDZD3Q86UT5 571 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 LRRC6Q86X45 466 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 PLXDC1Q8IUK5 500 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 CILP2Q8IUL8 1156 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 IGDCC3Q8IVU1 814 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 AGBL5Q8NDL9 886 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 LKAAEAR1Q8TD35 194 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 LPGAT1Q92604 370 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 RSC1A1Q92681 617 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 C9orf72Q96LT7 481 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 THSD1Q9NS62 852 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 ANAPC5Q9UJX4 755 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 PCDHGA3Q9Y5H0 932 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 FAM169AQ9Y6X4 670 aa11.46□□□□□ -0.57
HMGXB3-203ENST00000510472 ZFC3H1O60293 1989 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 B4E171 279 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 C9orf172C9J069 976 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 SMAPO00193 183 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 CAPN5O15484 640 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 SLCO2B1O94956 709 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 SEC31AO94979 1220 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 S1PR4O95977 384 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 TPBGLP0DKB5 382 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 AMD1P17707 334 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 PAMP19021 973 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 OGNP20774 298 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 SLC5A2P31639 672 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 TSPAN7P41732 249 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 CAPZBP47756 277 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 LEPRP48357 1165 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 BOP1Q14137 746 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF789Q5FWF6 425 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 CTSL3PQ5NE16 218 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 MRNIPQ6NTE8 343 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 CASC4Q6P4E1 433 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 NAPRTQ6XQN6 538 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 PHC3Q8NDX5 983 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 JPH3Q8WXH2 748 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 KLHL6Q8WZ60 621 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 ELMO1Q92556 727 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 TFGQ92734 400 aaPredicted RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 KRT12Q99456 494 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 WDR83Q9BRX9 315 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 TRIM51Q9BSJ1 452 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 SPRY4Q9C004 299 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 TFB2MQ9H5Q4 396 aaKnown RBP11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 MVB12BQ9H7P6 319 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 LATS2Q9NRM7 1088 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 OCIAD1Q9NX40 245 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 SAMD15Q9P1V8 674 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 PISDQ9UG56 409 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 HEBP2Q9Y5Z4 205 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 COLEC10Q9Y6Z7 277 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 LAMA5O15230 3695 aa11.45□□□□□ -0.58
HMGXB3-203ENST00000510472 ANKRD11Q6UB99 2663 aaPredicted RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 KIF26BQ2KJY2 2108 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 CFAP47Q6ZTR5 3102 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 OR5K3A6NET4 321 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 F8W8V4 182 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 IFRD1O00458 451 aaPredicted RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 NDUFS3O75489 264 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 JMJD7P0C870 316 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 CSTF2P33240 577 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 MAPK9P45984 424 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 MC2RQ01718 297 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 DHX9Q08211 1270 aaKnown RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 GBX1Q14549 363 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 RNF187Q5TA31 235 aaPredicted RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 FOXR1Q6PIV2 292 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 PRSS42Q7Z5A4 293 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 SDCCAG8Q86SQ7 713 aaPredicted RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 VRK3Q8IV63 474 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 LMNTD2Q8IXW0 634 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 SLC22A15Q8IZD6 547 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 KRT222Q8N1A0 295 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF248Q8NDW4 579 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 ACVR1CQ8NER5 493 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 USP7Q93009 1102 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF669Q96BR6 464 aaPredicted RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 STAMBPL1Q96FJ0 436 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 ZDHHC12Q96GR4 267 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 PWWP2AQ96N64 755 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 NRTNQ99748 197 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 EBNA1BP2Q99848 306 aaKnown RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 ZNF768Q9H5H4 540 aaKnown RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 SIDT1Q9NXL6 827 aaKnown RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 IL1RAPL1Q9NZN1 696 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 MED16Q9Y2X0 877 aa11.44□□□□□ -0.58
HMGXB3-203ENST00000510472 MAD1L1Q9Y6D9 718 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms