RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MAP3K3Q99759 626 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 RAB33BQ9H082 229 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 IMP3Q9NV31 184 aaKnown RBP10.64□□□□□ -0.71
RNF4-212ENST00000509258 SEMA5BQ9P283 1151 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 EPHA6Q9UF33 1036 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 LNPEPQ9UIQ6 1025 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 PLAAQ9Y263 795 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 MAN2B2Q9Y2E5 1009 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 AAR2Q9Y312 384 aaKnown RBP10.64□□□□□ -0.71
RNF4-212ENST00000509258 DNMT3AQ9Y6K1 912 aaPredicted RBP10.64□□□□□ -0.71
RNF4-212ENST00000509258 PRSS21Q9Y6M0 314 aa10.64□□□□□ -0.71
RNF4-212ENST00000509258 NOTCH2Q04721 2471 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 RP1L1Q8IWN7 2480 aaPredicted RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 IGLV3-16A0A075B6K0 115 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 TRBV5-4A0A0C4DH59 114 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 KLHL33A6NCF5 533 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 C2orf81A6NN90 581 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 IPO7O95373 1038 aaKnown RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 RECKO95980 971 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 POLBP06746 335 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 FURINP09958 794 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 EBLN1P0CF75 366 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 FGF5P12034 268 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 FOLR1P15328 257 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PDHA2P29803 388 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 MC4RP32245 332 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 CD97P48960 835 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PRLHRP49683 370 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PMS2P54278 862 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PDE1BQ01064 536 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 ACY1Q03154 408 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 ERV3-1Q14264 604 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 POU6F1Q14863 301 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PLCL1Q15111 1095 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 SIX1Q15475 284 aaPredicted RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 OASLQ15646 514 aaKnown RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 PARP6Q2NL67 630 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
RNF4-212ENST00000509258 CCDC38Q502W7 563 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 CAPRIN2Q6IMN6 1127 aaKnown RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 CLDN19Q8N6F1 224 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 ZNF514Q96K75 400 aaPredicted RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 CALR3Q96L12 384 aaKnown RBP10.63□□□□□ -0.71
RNF4-212ENST00000509258 C12orf66Q96MD2 445 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 FCRL4Q96PJ5 515 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 CD180Q99467 661 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 SLC2A6Q9UGQ3 507 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 RARRES3Q9UL19 164 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PADI1Q9ULC6 663 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PCDHGA6Q9Y5G7 932 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 PCM1Q15154 2024 aa10.63□□□□□ -0.71
RNF4-212ENST00000509258 C21orf140B9A014 251 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 KATNA1O75449 491 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 NELFEP18615 380 aaKnown RBP10.62□□□□□ -0.71
RNF4-212ENST00000509258 NR1D1P20393 614 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 PREPP48147 710 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 KPNA2P52292 529 aaKnown RBP10.62□□□□□ -0.71
RNF4-212ENST00000509258 KIF5AQ12840 1032 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 DNASE1L3Q13609 305 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 PRPSAP1Q14558 356 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 DBN1Q16643 649 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 LONRF2Q1L5Z9 754 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 PRAMEF17Q5VTA0 474 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 ARMC6Q6NXE6 501 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 NAPRTQ6XQN6 538 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 ARHGEF18Q6ZSZ5 1173 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 ASB18Q6ZVZ8 466 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 SNX20Q7Z614 316 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 TMEM135Q86UB9 458 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 SERPINA9Q86WD7 417 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 KMT5CQ86Y97 462 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 CFAP206Q8IYR0 622 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 SIDT2Q8NBJ9 832 aaKnown RBP10.62□□□□□ -0.71
RNF4-212ENST00000509258 PHC3Q8NDX5 983 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 OR52K1Q8NGK4 314 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 C1orf54Q8WWF1 131 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 LRRC45Q96CN5 670 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 CDKN2AIPNLQ96HQ2 116 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 SLC41A2Q96JW4 573 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 LINC00615Q96LM1 132 aaPredicted RBP10.62□□□□□ -0.71
RNF4-212ENST00000509258 ZNF778Q96MU6 729 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 TWSG1Q9GZX9 223 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 OR52A5Q9H2C5 316 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 COG4Q9H9E3 785 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 NLE1Q9NVX2 485 aaPredicted RBP10.62□□□□□ -0.71
RNF4-212ENST00000509258 SLC24A2Q9UI40 661 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 CRLS1Q9UJA2 301 aa10.62□□□□□ -0.71
RNF4-212ENST00000509258 HEATR5BQ9P2D3 2071 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 PIPSLA2A3N6 862 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 CCDC162PA2VCL2 907 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 CDC14CA4D256 554 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 OR6C74A6NCV1 312 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 OR5K3A6NET4 321 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 MROH6A6NGR9 719 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 MIF4GDA9UHW6 222 aaKnown RBP10.61□□□□□ -0.71
RNF4-212ENST00000509258 H7C0S8 307 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 BTN3A3O00478 584 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 LIASO43766 372 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 SPAG6O75602 509 aa10.61□□□□□ -0.71
RNF4-212ENST00000509258 CREG1O75629 220 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms