RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 ABCA12Q86UK0 2595 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 TMEM202A6NGA9 273 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 CLGNO14967 610 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 TNFSF14O43557 240 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 BUB3O43684 328 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 KRT86O43790 486 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 TIPRLO75663 272 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 RFPL2O75678 378 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 F9P00740 461 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 MAOAP21397 527 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 EIF2S3P41091 472 aaKnown RBP4.03□□□□□ -1.76
NFKB1-208ENST00000509165 NT5C2P49902 561 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 TCP10Q12799 353 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 KRT81Q14533 505 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 MFSD14CQ5VZR4 134 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 FAM122CQ6P4D5 195 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 PSRC1Q6PGN9 363 aaPredicted RBP4.03□□□□□ -1.76
NFKB1-208ENST00000509165 LCTLQ6UWM7 567 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 TUBA1AQ71U36 451 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 MUC20Q8N307 709 aaPredicted RBP4.03□□□□□ -1.76
NFKB1-208ENST00000509165 ZBTB2Q8N680 514 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 SDR42E1Q8WUS8 393 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 ST8SIA4Q92187 359 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 RND1Q92730 232 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 PABPC5Q96DU9 382 aaKnown RBP4.03□□□□□ -1.76
NFKB1-208ENST00000509165 C12orf42Q96LP6 360 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 ZNF570Q96NI8 536 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 TUBA1CQ9BQE3 449 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 AGXT2Q9BYV1 514 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 C17orf75Q9HAS0 396 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 BRF2Q9HAW0 419 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 CNGB3Q9NQW8 809 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 DONSONQ9NYP3 566 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 KCND2Q9NZV8 630 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 CYP46A1Q9Y6A2 500 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 SCINQ9Y6U3 715 aa4.03□□□□□ -1.76
NFKB1-208ENST00000509165 ZNFX1Q9P2E3 1918 aaKnown RBP4.03□□□□□ -1.76
NFKB1-208ENST00000509165 SIP14410 1827 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 CFAP46Q8IYW2 2715 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 DOPEY1Q5JWR5 2465 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 IGHV4OR15-8A0A075B7B6 117 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 BMPR1BO00238 502 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 HIP1O00291 1037 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 SEC14L5O43304 696 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 EPB41L2O43491 1005 aaKnown RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 CNMDO75829 334 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 PGK1P00558 417 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 ASNSP08243 561 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 HSPD1P10809 573 aaKnown RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 IRF1P10914 325 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 G6PDP11413 515 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 GABRB2P47870 512 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 RAD23BP54727 409 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 HMGCS2P54868 508 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 ZBTB17Q13105 803 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 PPP2R5BQ15173 497 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 SHROOM1Q2M3G4 852 aaPredicted RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 EIF2S3LQ2VIR3 472 aaKnown RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 MCMDC2Q4G0Z9 681 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 UNQ6126/PRO20091Q6UXV3 157 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 QSOX2Q6ZRP7 698 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 SMAP1Q8IYB5 467 aaPredicted RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 GPRC5AQ8NFJ5 357 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 HUS1BQ8NHY5 278 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 LNX1Q8TBB1 728 aaPredicted RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 KLHL29Q96CT2 875 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 H2AFJQ9BTM1 129 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 LSG1Q9H089 658 aaKnown RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 PCDH9Q9HC56 1237 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 BPIFA1Q9NP55 256 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 MMP25Q9NPA2 562 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 SWAP70Q9UH65 585 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 FBXO9Q9UK97 447 aaPredicted RBP4.02□□□□□ -1.77
NFKB1-208ENST00000509165 SLC13A4Q9UKG4 626 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 RCOR1Q9UKL0 485 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 SARDHQ9UL12 918 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 RALGAPA2Q2PPJ7 1873 aa4.02□□□□□ -1.77
NFKB1-208ENST00000509165 ITPR3Q14573 2671 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 KALRNO60229 2985 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 FANCMQ8IYD8 2048 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 CCDC196A0A1B0GTZ2 297 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 A0A1W2PRG0 241 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 TTC36A6NLP5 189 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 HNRNPCL2B2RXH8 293 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 TSPAN4O14817 238 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 FTCDO95954 541 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 IGLV2-11P01706 119 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 PCP11498 1178 aaKnown RBP4.01□□□□□ -1.77
NFKB1-208ENST00000509165 ABCD3P28288 659 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 MAPK4P31152 587 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 METAP2P50579 478 aaKnown RBP eCLIP4.01□□□□□ -1.77
NFKB1-208ENST00000509165 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
NFKB1-208ENST00000509165 ARL16Q0P5N6 197 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 SPP2Q13103 211 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 ALG11Q2TAA5 492 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 ZNF628Q5EBL2 1059 aa4.01□□□□□ -1.77
NFKB1-208ENST00000509165 MEX3BQ6ZN04 569 aaKnown RBP4.01□□□□□ -1.77
NFKB1-208ENST00000509165 USP43Q70EL4 1123 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms