RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ASCL3Q9NQ33 180 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 RAD18Q9NS91 495 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 GRHL1Q9NZI5 618 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 GALPQ9UBC7 116 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 FAM8A1Q9UBU6 413 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNHIT2Q9UHR6 403 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CRLS1Q9UJA2 301 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CDYLQ9Y232 598 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 CFAP20Q9Y6A4 193 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 SAR1BQ9Y6B6 198 aa7.06□□□□□ -1.28
TOPBP1-207ENST00000509162 HEATR9A2RTY3 570 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 CTAGE9A4FU28 777 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 NEMP2A6NFY4 417 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 GPR89AB7ZAQ6 455 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 AGRPO00253 132 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 NUDT21O43809 227 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PPFIA2O75334 1257 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 POP7O75817 140 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 SEC31AO94979 1220 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 GPR89BP0CG08 455 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 THRAP10827 490 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 GLB1P16278 677 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ADRA1DP25100 572 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PDHA2P29803 388 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 AKT1P31749 480 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ABCG1P45844 678 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 IDH3AP50213 366 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PGGT1BP53609 377 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 TIAL1Q01085 375 aaKnown RBP eCLIP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ZFP36L1Q07352 338 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ITGA9Q13797 1035 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ITIH4Q14624 930 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 RPE65Q16518 533 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 INSCQ1MX18 579 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ZRANB3Q5FWF4 1079 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PCID2Q5JVF3 399 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 LDLRAP1Q5SW96 308 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 AGAP9Q5VTM2 703 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 IZUMO3Q5VZ72 239 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ZDHHC20Q5W0Z9 365 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 KIAA0930Q6ICG6 404 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 CCDC70Q6NSX1 233 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 HIBCHQ6NVY1 386 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF549Q6P9A3 640 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 TRMT10BQ6PF06 316 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ABRAXAS1Q6UWZ7 409 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ZDHHC24Q6UX98 284 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 CENPUQ71F23 418 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 GSTA5Q7RTV2 222 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 LINC00523Q86TU6 105 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 TMPRSS12Q86WS5 348 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 KRT222Q8N1A0 295 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 DNAAF3Q8N9W5 541 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 NOA1Q8NC60 698 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 SPATA4Q8NEY3 305 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PPHLN1Q8NEY8 458 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 GDAP1Q8TB36 358 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 LPGAT1Q92604 370 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 NAT6Q93015 286 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 ZNF669Q96BR6 464 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PPM1MQ96MI6 270 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 KRT12Q99456 494 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 FERMT1Q9BQL6 677 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 WWP1Q9H0M0 922 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 LRRN3Q9H3W5 708 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 OSGEPL1Q9H4B0 414 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 SYNDIG1Q9H7V2 258 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 LRIT1Q9P2V4 623 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 FOXD3Q9UJU5 478 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 PSMD13Q9UNM6 376 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 CLCA2Q9UQC9 943 aa7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 RUVBL2Q9Y230 463 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-207ENST00000509162 MN1Q10571 1320 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ACACAQ13085 2346 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 IGHV5-10-1A0A0J9YXX1 117 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SLC5A10A0PJK1 596 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 TRABD2BA6NFA1 517 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 LILRA5A6NI73 299 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 PDZK1P1A8MUH7 402 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 E7EVH7 732 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 KMOO15229 486 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 PSMD3O43242 534 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 BRINP1O60477 761 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 MPOP05164 745 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 PROS1P07225 676 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 MTHFD1P11586 935 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ITGB6P18564 788 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ITIH1P19827 911 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 GABRB3P28472 473 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ECHS1P30084 290 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 PEBP1P30086 187 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 CCR7P32248 378 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 HADHAP40939 763 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 SLC1A2P43004 574 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 LEPRP48357 1165 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 LMAN1P49257 510 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 ITGA8P53708 1063 aa7.04□□□□□ -1.28
TOPBP1-207ENST00000509162 MPP1Q00013 466 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms