RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TJP2Q9UDY2 1190 aa3.87□□□□□ -1.79
NEDD4-209ENST00000508871 A0A087WUV0 522 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HTR3EA5X5Y0 456 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 LIPT2A6NK58 231 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 A8MX80 341 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 B4GALT2O60909 372 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CIITAP33076 1130 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ME1P48163 572 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CCR3P51677 355 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DGKEP52429 567 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 NCKAP1LP55160 1127 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ITGA1P56199 1179 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 P2RX3P56373 397 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ARHGAP8P85298 464 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 FOXK2Q01167 660 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CTBP1Q13363 440 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CLCA4Q14CN2 919 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KCNT1Q5JUK3 1230 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 C10orf120Q5SQS8 335 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MPP7Q5T2T1 576 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TAF2Q6P1X5 1199 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 USP17L6PQ6QN14 398 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 AKAP14Q86UN6 197 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 VASH2Q86V25 355 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TOP6BLQ8N6T0 577 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MFSD2AQ8NA29 543 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MCPH1Q8NEM0 835 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MEGF10Q96KG7 1140 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ABHD14AQ9BUJ0 271 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DEFB129Q9H1M3 183 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CHST8Q9H2A9 424 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ARL15Q9NXU5 204 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CD274Q9NZQ7 290 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DAPP1Q9UN19 280 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 COG5Q9UP83 839 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CYP3A7-CYP3A51PA0A087WV96 503 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KBTBD13C9JR72 458 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLC22A2O15244 555 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 HSPA12AO43301 675 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 VPS26AO75436 327 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OR6B1O95007 311 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PLEKHA8P1O95397 391 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PTPRFP10586 1907 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CYP3A7P24462 503 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KLRC1P26715 233 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PRDX6P30041 224 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CSTF2P33240 577 aaKnown RBP eCLIP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SLC26A3P40879 764 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SERPINH1P50454 418 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 EFNB1P98172 346 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 GHRHRQ02643 423 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PIGFQ07326 219 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 STIM1Q13586 685 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CLPPQ16740 277 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 AOC3Q16853 763 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 FAM174BQ3ZCQ3 159 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ARHGAP40Q5TG30 622 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 VASNQ6EMK4 673 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PLA2G4DQ86XP0 818 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 APOBEC3FQ8IUX4 373 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SCML4Q8N228 414 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ARHGEF39Q8N4T4 335 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 GAL3ST3Q96A11 431 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RCC1LQ96I51 464 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ELMO2Q96JJ3 720 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SERINC2Q96SA4 455 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ATP6V0BQ99437 205 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 BCL7BQ9BQE9 202 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OCSTAMPQ9BR26 566 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 URM1Q9BTM9 101 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ADGRE3Q9BY15 652 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RGCCQ9H4X1 137 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 EXO5Q9H790 373 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CARS2Q9HA77 564 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CD93Q9NPY3 652 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KDM3AQ9Y4C1 1321 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 INPPL1O15357 1258 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TEX33O43247 280 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PFDN1O60925 122 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 USP12O75317 370 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RBMXL2O75526 392 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ATE1O95260 518 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ALDOAP04075 364 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OCMP0CE72 109 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CHN1P15882 459 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 PRKCAP17252 672 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ADCY7P51828 1080 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RABGGTBP53611 331 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 LIMK2P53671 638 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RHAGQ02094 409 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TNFRSF17Q02223 184 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 IL24Q13007 206 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 DRP2Q13474 957 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SMTNL2Q2TAL5 461 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 USP41Q3LFD5 358 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 NOMO2Q5JPE7 1267 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CLVS2Q5SYC1 327 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 RNASEH2BQ5TBB1 312 aaKnown RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TTC27Q6P3X3 843 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 CLEC2AQ6UVW9 174 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms