RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TUBA1CQ9BQE3 449 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PLGRKTQ9HBL7 147 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 MAGEE1Q9HCI5 957 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 RIC8BQ9NVN3 520 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 ZIM2Q9NZV7 527 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 PKP3Q9Y446 797 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 GPR45Q9Y5Y3 372 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 WNT6Q9Y6F9 365 aa10.85□□□□□ -0.67
SH3RF1-203ENST00000508685 H0YAE9 185 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 H7C0S8 307 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SOX1O00570 391 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 GIPC1O14908 333 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 KLK8O60259 260 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 NIPSNAP2O75323 286 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 RHOBTB1O94844 696 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 IGSF6O95976 241 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 TRBC1P01850 177 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CAPN3P20807 821 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 DDX6P26196 483 aaKnown RBP eCLIP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ADARP55265 1226 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CDH13P55290 713 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 UBE3AQ05086 875 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 OR4D1Q15615 310 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF77Q15935 545 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 PDCD4Q53EL6 469 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CTSL3PQ5NE16 218 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 LY6G5CQ5SRR4 150 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 FAM151BQ6UXP7 276 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 TAS2R42Q7RTR8 314 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ADGRD2Q7Z7M1 963 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 PATL1Q86TB9 770 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SPPL2CQ8IUH8 684 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ADGRG5Q8IZF4 528 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 DHRSXQ8N5I4 330 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 AADATQ8N5Z0 425 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 NAT16Q8N8M0 369 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 IRF7Q92985 503 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF707Q96C28 371 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 GPR21Q99679 349 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ATP13A3Q9H7F0 1226 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SPHK2Q9NRA0 654 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CMTM6Q9NX76 183 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 GALNT8Q9NY28 637 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 PKD2L2Q9NZM6 624 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SUN2Q9UH99 717 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 POLG2Q9UHN1 485 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNHIT2Q9UHR6 403 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SLCO3A1Q9UIG8 710 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HS3ST2Q9Y278 367 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 RWDD3Q9Y3V2 267 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 IQCF5A8MTL0 148 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 UBXN8O00124 270 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 FXYD1O00168 92 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 GAPDHSO14556 408 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ARPC2O15144 300 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 PFDN1O60925 122 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 XYLBO75191 536 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CLDN7O95471 211 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 PRAMEF1O95521 474 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 FGF19O95750 216 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 RPS17P08708 135 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 TSPAN8P19075 237 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HTR1EP28566 365 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 PCSK6P29122 969 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HOXA9P31269 272 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CA5AP35218 305 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HNF1BP35680 557 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 TTPAP49638 278 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 NFYCQ13952 458 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 RCAN2Q14206 197 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 C22orf39Q6P5X5 142 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 TSPAN33Q86UF1 283 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF786Q8N393 782 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 POP5Q969H6 163 aaKnown RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 TMEM125Q96AQ2 219 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 KCTD14Q9BQ13 255 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 BDH2Q9BUT1 245 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 OSBPL6Q9BZF3 934 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 BRINP2Q9C0B6 783 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ALG2Q9H553 416 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ZFYVE1Q9HBF4 777 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SLC52A3Q9NQ40 469 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 AIG1Q9NVV5 245 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SMOXQ9NWM0 555 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 SMPD3Q9NY59 655 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 HECAQ9UBI9 543 aaPredicted RBP10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 ANAPC2Q9UJX6 822 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 IKZF3Q9UKT9 509 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 CDH7Q9ULB5 785 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 COMMD10Q9Y6G5 202 aa10.84□□□□□ -0.67
SH3RF1-203ENST00000508685 MYOCOSA0A1B0GUC4 107 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 NPIPB15A6NHN6 443 aaPredicted RBP10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms