RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 MCOLN3Q8TDD5 553 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 MTERF1Q99551 399 aaKnown RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 SCN3BQ9NY72 215 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 TOR1BO14657 336 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 SMIM18P0DKX4 95 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 PCSK6P29122 969 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 HOXC13P31276 330 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 ENTPD1P49961 510 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 GTDC1Q4AE62 458 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 PABPC1LQ4VXU2 614 aaKnown RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 TTC23Q5W5X9 447 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 RSPO2Q6UXX9 243 aaPredicted RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 PLD3Q8IV08 490 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 ADHFE1Q8IWW8 467 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 HS3ST5Q8IZT8 346 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 HIPK3Q9H422 1215 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 CAPN15O75808 1086 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 GLUD1P00367 558 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 C8BP07358 591 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 MTHFD2P13995 350 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 VARSP26640 1264 aaKnown RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 HOXD9P28356 352 aaPredicted RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 CYP4F3Q08477 520 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 AAK1Q2M2I8 961 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 NECAB2Q7Z6G3 386 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 UTP15Q8TED0 518 aaKnown RBP12.66□□□□□ -0.38
SMG7-214ENST00000508461 GIPC3Q8TF64 312 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 SH3KBP1Q96B97 665 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 ASB1Q9Y576 335 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 PCDHB1Q9Y5F3 818 aa12.66□□□□□ -0.38
SMG7-214ENST00000508461 ANK1P16157 1881 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 ZNF840PA6NDX5 716 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SERPINA1P01009 418 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 INHAP05111 366 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 CDH2P19022 906 aaPredicted RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 STK19P49842 368 aaPredicted RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 PPP4R4Q6NUP7 873 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 USP45Q70EL2 814 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 C11orf96Q7Z7L8 435 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 GALNT10Q86SR1 603 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 ST13P5Q8NFI4 369 aaPredicted RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 CD200R1Q8TD46 325 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 KCNJ9Q92806 393 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 FOPNLQ96NB1 174 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 DEFB118Q96PH6 123 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SLC25A13Q9UJS0 675 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 ZNF229Q9UJW7 825 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 LCTP09848 1927 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 TCRBV3S1A0A5B6 114 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 J3QRK9 145 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 CXCR6O00574 342 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 TRIM24O15164 1050 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 ADAMTS4O75173 837 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 HSMCR30P0CW71 290 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 CCNA2P20248 432 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 PRIM2P49643 509 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 XKR6Q5GH73 641 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 OGFOD2Q6N063 350 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 HMBOX1Q6NT76 420 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 CERS6Q6ZMG9 384 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 TAGAPQ8N103 731 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 MINDY1Q8N5J2 469 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 ZNF366Q8N895 744 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 FBXL8Q96CD0 374 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 NSMCE3Q96MG7 304 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 RPF2Q9H7B2 306 aaKnown RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 TRIM17Q9Y577 477 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 A0A1W2PQ45 241 aaPredicted RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 A0A1W2PQY0 241 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SLC28A1O00337 649 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 KPNA3O00505 521 aaPredicted RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 CYP2A7P20853 494 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SPAM1P38567 509 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 PSMD7P51665 324 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SNRPD1P62314 119 aaKnown RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 DSC3Q14574 896 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 TRIM16LQ309B1 348 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 ADCK2Q7Z695 626 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 PATL1Q86TB9 770 aaKnown RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 TMEM126BQ8IUX1 230 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SLC22A15Q8IZD6 547 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 C2orf73Q8N5S3 287 aaPredicted RBP12.65□□□□□ -0.38
SMG7-214ENST00000508461 TMEM159Q96B96 161 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 RERGLQ9H628 205 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 IKZF3Q9UKT9 509 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 SQORQ9Y6N5 450 aa12.65□□□□□ -0.38
SMG7-214ENST00000508461 WASH4PA8MWX3 477 aa12.64□□□□□ -0.39
SMG7-214ENST00000508461 NEDD8-MDP1E9PL57 170 aa12.64□□□□□ -0.39
SMG7-214ENST00000508461 VILLO15195 856 aa12.64□□□□□ -0.39
SMG7-214ENST00000508461 CACNG3O60359 315 aa12.64□□□□□ -0.39
SMG7-214ENST00000508461 ATF6P18850 670 aa12.64□□□□□ -0.39
SMG7-214ENST00000508461 CTGFP29279 349 aa12.64□□□□□ -0.39
SMG7-214ENST00000508461 IDH2P48735 452 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms