RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 ZNF624Q9P2J8 865 aaPredicted RBP4.79□□□□□ -1.64
GYPA-205ENST00000508337 ERRFI1Q9UJM3 462 aaPredicted RBP4.79□□□□□ -1.64
GYPA-205ENST00000508337 PLAGL1Q9UM63 463 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 PCDHGB4Q9UN71 923 aa4.79□□□□□ -1.64
GYPA-205ENST00000508337 PRSS51A0A1B0GVH4 220 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 A0A1W2PRB8 838 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 AGAP14A8MT82 685 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 GFPT2O94808 682 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 FGF5P12034 268 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 CBLP22681 906 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 SUOXP51687 545 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 PDX1P52945 283 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 SIRPAP78324 504 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 MELKQ14680 651 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 TOMM20Q15388 145 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 ARHGEF16Q5VV41 709 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 SPATA1Q5VX52 437 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 LDB1Q86U70 411 aaPredicted RBP4.78□□□□□ -1.64
GYPA-205ENST00000508337 KBTBD6Q86V97 674 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 FAM114A1Q8IWE2 563 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 CFAP206Q8IYR0 622 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 TTC30BQ8N4P2 665 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 CCDC89Q8N998 374 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 WDR20Q8TBZ3 569 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 LRRC59Q96AG4 307 aaKnown RBP4.78□□□□□ -1.64
GYPA-205ENST00000508337 F2RL3Q96RI0 385 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 KCNK15Q9H427 330 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 GIMAP4Q9NUV9 329 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 ADPRHL2Q9NX46 363 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 RABGAP1Q9Y3P9 1069 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 C2CD2Q9Y426 696 aa4.78□□□□□ -1.64
GYPA-205ENST00000508337 TCF20Q9UGU0 1960 aaKnown RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 A0A1W2PR77 199 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 PLOD2O00469 737 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 EDIL3O43854 480 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 WISP2O76076 250 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 STARD3NLO95772 234 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 PLGP00747 810 aaPredicted RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 PORP16435 677 aaPredicted RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 CHRNB4P30926 498 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 ACTN2P35609 894 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 CXCL9Q07325 125 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 STK4Q13043 487 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 PRKAA1Q13131 559 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 ANO5Q75V66 913 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 AACSQ86V21 672 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 CRYBG2Q8N1P7 616 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 OR2T12Q8NG77 320 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 PRPF31Q8WWY3 499 aaKnown RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 MYADMQ96S97 322 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 CDRT15Q96T59 188 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 MRPL1Q9BYD6 325 aaKnown RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 BARHL1Q9BZE3 327 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 RSPH9Q9H1X1 276 aaPredicted RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 SLA2Q9H6Q3 261 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 DDX43Q9NXZ2 648 aaKnown RBP4.77□□□□□ -1.65
GYPA-205ENST00000508337 NPAP1Q9NZP6 1156 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 RPS6KA6Q9UK32 745 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 SNX8Q9Y5X2 465 aa4.77□□□□□ -1.65
GYPA-205ENST00000508337 OR2A25A4D2G3 310 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 CSPG5O95196 566 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 GCNT3O95395 438 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 BCL10O95999 233 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 TUBBP07437 444 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 VDRP11473 427 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 DCTP40126 519 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 THOP1P52888 689 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 TUBB4BP68371 445 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 UBXN2AP68543 259 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 NR1D2Q14995 579 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 RRS1Q15050 365 aaKnown RBP4.76□□□□□ -1.65
GYPA-205ENST00000508337 CFAP58Q5T655 872 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 KRT79Q5XKE5 535 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 FAM109BQ6ICB4 259 aaPredicted RBP4.76□□□□□ -1.65
GYPA-205ENST00000508337 ADAM5Q6NVV9 412 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 ZNF554Q86TJ5 538 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 TMEM173Q86WV6 379 aaPredicted RBP4.76□□□□□ -1.65
GYPA-205ENST00000508337 ABHD6Q9BV23 337 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 MXD3Q9BW11 206 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 MMP27Q9H306 513 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 NAP1L2Q9ULW6 460 aaPredicted RBP4.76□□□□□ -1.65
GYPA-205ENST00000508337 GAB2Q9UQC2 676 aa4.76□□□□□ -1.65
GYPA-205ENST00000508337 RSF1Q96T23 1441 aaPredicted RBP4.75□□□□□ -1.65
GYPA-205ENST00000508337 C5orf60A6NFR6 353 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 PRSS47A8MTI9 375 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 GJB3O75712 270 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 TPOP07202 933 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 PLA2G4BP0C869 781 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 IGHV4-38-2P0DP08 117 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 ACP2P11117 423 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 NR1D1P20393 614 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 TIMP3P35625 211 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 NNMTP40261 264 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 ATP12AP54707 1039 aa4.75□□□□□ -1.65
GYPA-205ENST00000508337 GTDC1Q4AE62 458 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms