RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ARHGEF18Q6ZSZ5 1173 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 TMEM135Q86UB9 458 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 CFAP206Q8IYR0 622 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 FAM71DQ8N9W8 422 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 DCUN1D1Q96GG9 259 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 ABHD17AQ96GS6 310 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 RUFY1Q96T51 708 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 COPS8Q99627 209 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 OR52A5Q9H2C5 316 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 COG4Q9H9E3 785 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 AKIRIN1Q9H9L7 192 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 ZNF71Q9NQZ8 489 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 KCND3Q9UK17 655 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 POMT2Q9UKY4 750 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 POLHQ9Y253 713 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 BTRCQ9Y297 605 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 R3HDM2Q9Y2K5 976 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 PCDHB3Q9Y5E6 796 aa12.67□□□□□ -0.38
HMGCS1-205ENST00000508319 C21orf140B9A014 251 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 CFAP99D6REC4 459 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 DDX3YO15523 660 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 KATNA1O75449 491 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 METTL18O95568 372 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ZBTB11O95625 1053 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 NTRK1P04629 796 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 PRSS56P0CW18 603 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ACRV1P26436 265 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 NDUFS1P28331 727 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ARCN1P48444 511 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ARL4DP49703 201 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 CDKN1CP49918 316 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 TUBB4BP68371 445 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 LAMB3Q13751 1172 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 TUBB2AQ13885 445 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 SEPT6Q14141 434 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 GPR19Q15760 415 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 PARP6Q2NL67 630 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 GPR33Q49SQ1 333 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 LACTB2Q53H82 288 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 FBXO38Q6PIJ6 1188 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 PEX26Q7Z412 305 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 BPHLQ86WA6 291 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 CARFQ8N187 725 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ZNF501Q96CX3 271 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 NRTNQ99748 197 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 CCM2Q9BSQ5 444 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 TUBB2BQ9BVA1 445 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 LRRC40Q9H9A6 602 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ZDHHC3Q9NYG2 299 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 ANAPC2Q9UJX6 822 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 AMFRQ9UKV5 643 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 HEBP2Q9Y5Z4 205 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 SEC16AO15027 2179 aa12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 USP9XQ93008 2570 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-205ENST00000508319 C17orf113A0A1B0GUU1 675 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 TCRBV7S2A1N4TA0A589 114 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 CDC14CA4D256 554 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 MIF4GDA9UHW6 222 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 CPNE3O75131 537 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 CREG1O75629 220 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 FTCDO95954 541 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 POLR2CP19387 275 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 NR1D1P20393 614 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 CASRP41180 1078 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 GSE1Q14687 1217 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 POU6F1Q14863 301 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 ARMC6Q6NXE6 501 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 FAM199XQ6PEV8 388 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 SERPINA9Q86WD7 417 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 PIANPQ8IYJ0 282 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 UBL4BQ8N7F7 174 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 TTC13Q8NBP0 860 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 ACVR1CQ8NER5 493 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 OR4E2Q8NGC2 313 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 SLC35B2Q8TB61 432 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 HEXDCQ8WVB3 486 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 DESI2Q9BSY9 194 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 ACTL8Q9H568 366 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 VPS37BQ9H9H4 285 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 PIH1D1Q9NWS0 290 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 TP53TG5Q9Y2B4 290 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
HMGCS1-205ENST00000508319 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 PIPSLA2A3N6 862 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 K7EM74 188 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 ARHGAP6O43182 974 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 SCRG1O75711 98 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 AP2A1O95782 977 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 RECKO95980 971 aa12.64□□□□□ -0.39
HMGCS1-205ENST00000508319 TPH1P17752 444 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms