RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NAT14Q8WUY8 206 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 C12orf66Q96MD2 445 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 WWP1Q9H0M0 922 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 SIRPGQ9P1W8 387 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 PSMC3IPQ9P2W1 217 aaPredicted RBP19.65■□□□□ 0.74
USP53-203ENST00000507597 TLK1Q9UKI8 766 aa19.65■□□□□ 0.74
USP53-203ENST00000507597 ADAMTS9Q9P2N4 1935 aa19.64■□□□□ 0.74
USP53-203ENST00000507597 SIGLEC6O43699 453 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 SH3BP5O60239 455 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 PIAS1O75925 651 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 FDXRP22570 491 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 EFTUD2Q15029 972 aaKnown RBP eCLIP19.64■□□□□ 0.73
USP53-203ENST00000507597 RBM20Q5T481 1227 aaKnown RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 CAPRIN2Q6IMN6 1127 aaKnown RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 ADGRD1Q6QNK2 874 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 FAM83HQ6ZRV2 1179 aaPredicted RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 RAPH1Q70E73 1250 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 PDZD3Q86UT5 571 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 MYO1HQ8N1T3 1032 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 RIBC1Q8N443 379 aaPredicted RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 SFRP1Q8N474 314 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 SIDT2Q8NBJ9 832 aaKnown RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 TFGQ92734 400 aaPredicted RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 CNDP2Q96KP4 475 aaKnown RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 APOLD1Q96LR9 279 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 MCMBPQ9BTE3 642 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 OR52A5Q9H2C5 316 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 MVB12BQ9H7P6 319 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 POLG2Q9UHN1 485 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 PADI4Q9UM07 663 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 PSMD13Q9UNM6 376 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 MTO1Q9Y2Z2 717 aaKnown RBP19.64■□□□□ 0.73
USP53-203ENST00000507597 ST14Q9Y5Y6 855 aa19.64■□□□□ 0.73
USP53-203ENST00000507597 KNL1Q8NG31 2342 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 TP53BP1Q12888 1972 aaPredicted RBP19.63■□□□□ 0.73
USP53-203ENST00000507597 LRP4O75096 1905 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 TMEM131Q92545 1883 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 RHPN2P1A8MT19 583 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 TRIM38O00635 465 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 NUDT21O43809 227 aaKnown RBP19.63■□□□□ 0.73
USP53-203ENST00000507597 CDH16O75309 829 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 TCEA3O75764 348 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 GIMD1P0DJR0 217 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 MPC1LP0DKB6 136 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 CDK4P11802 303 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 PNLIPP16233 465 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 GLB1P16278 677 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 CKMT2P17540 419 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 CCNFP41002 786 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 FASLGP48023 281 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 SERPINB8P50452 374 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 RAB10P61026 200 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 RASA2Q15283 850 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 ZNF658BQ4V348 819 aaPredicted RBP19.63■□□□□ 0.73
USP53-203ENST00000507597 TAF1BQ53T94 588 aaPredicted RBP19.63■□□□□ 0.73
USP53-203ENST00000507597 MROH9Q5TGP6 573 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 UNC5DQ6UXZ4 953 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 TDRPQ86YL5 185 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 NAGSQ8N159 534 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 RAB42Q8N4Z0 105 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 LKAAEAR1Q8TD35 194 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 CD200R1Q8TD46 325 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 FAM136AQ96C01 138 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 CABS1Q96KC9 395 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 GPAMQ9HCL2 828 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 CPNE7Q9UBL6 633 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 ASF1AQ9Y294 204 aa19.63■□□□□ 0.73
USP53-203ENST00000507597 A6NCN8 305 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 RASGRF2O14827 1237 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 SLC30A4O14863 429 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 TNFSF14O43557 240 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 FAM155BO75949 473 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 MTHFD1P11586 935 aaKnown RBP19.62■□□□□ 0.73
USP53-203ENST00000507597 CKMT1AP12532 417 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 CSRP1P21291 193 aaKnown RBP19.62■□□□□ 0.73
USP53-203ENST00000507597 TYK2P29597 1187 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 ABCG1P45844 678 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 PREPP48147 710 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 CDKN2DP55273 166 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 TAS2R39P59534 338 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 HHEXQ03014 270 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 RPE65Q16518 533 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 TBC1D21Q8IYX1 336 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 ARL14Q8N4G2 192 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 PHC3Q8NDX5 983 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 PKNOX2Q96KN3 472 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 TSNARE1Q96NA8 513 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 FERD3LQ96RJ6 166 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 EPB41L4BQ9H329 900 aa19.62■□□□□ 0.73
USP53-203ENST00000507597 TRIT1Q9H3H1 467 aaKnown RBP19.62■□□□□ 0.73
USP53-203ENST00000507597 IMP3Q9NV31 184 aaKnown RBP19.62■□□□□ 0.73
USP53-203ENST00000507597 TDRD6O60522 2096 aaKnown RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 EME2A4GXA9 379 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 ZBTB14O43829 449 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 NOBOXO60393 691 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 CATP04040 527 aaKnown RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 F7P08709 466 aaPredicted RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 MAP4P27816 1152 aaKnown RBP19.61■□□□□ 0.73
USP53-203ENST00000507597 PDHA2P29803 388 aa19.61■□□□□ 0.73
USP53-203ENST00000507597 SLC26A3P40879 764 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms