RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	KIFC1	Q9BW19	673 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	DDX47	Q9H0S4	455 aa	Known RBP	13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	HRASLS2	Q9NWW9	162 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SLC24A2	Q9UI40	661 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NEU2	Q9Y3R4	380 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	HEBP2	Q9Y5Z4	205 aa		13.8	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PTPRQ	Q9UMZ3	2332 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GOLGA8K	D6RF30	607 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GOLGA8T	H3BQL2	631 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	VAPB	O95292	243 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GSTM1	P09488	218 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	LIPC	P11150	499 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NDUFS1	P28331	727 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MAGEA6	P43360	314 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ARCN1	P48444	511 aa	Known RBP	13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TMPRSS3	P57727	454 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MC2R	Q01718	297 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	GSTM4	Q03013	218 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FOXM1	Q08050	763 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RPA4	Q13156	261 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZNF658B	Q4V348	819 aa	Predicted RBP	13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SYTL3	Q4VX76	610 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ARHGAP40	Q5TG30	622 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ARMC6	Q6NXE6	501 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CAND1	Q86VP6	1230 aa	Known RBP	13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MPP5	Q8N3R9	675 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	BMPER	Q8N8U9	685 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OR4E2	Q8NGC2	313 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZFPM2	Q8WW38	1151 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TFG	Q92734	400 aa	Predicted RBP	13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RNF31	Q96EP0	1072 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SGSM3	Q96HU1	749 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NAPG	Q99747	312 aa	Predicted RBP	13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ASPSCR1	Q9BZE9	553 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PRORY	Q9H606	182 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	KIR3DX1	Q9H7L2	352 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MRM3	Q9HC36	420 aa	Known RBP	13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	APMAP	Q9HDC9	416 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	EPHA6	Q9UF33	1036 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ACSL6	Q9UKU0	697 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SOX13	Q9UN79	622 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PCDHB11	Q9Y5F2	797 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PCDHGA3	Q9Y5H0	932 aa		13.79	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CTAGE9	A4FU28	777 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OR6C74	A6NCV1	312 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OR5K3	A6NET4	321 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	IQCF5	A8MTL0	148 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459		F8W8V4	182 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	LIN7A	O14910	233 aa	Predicted RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	POLR1C	O15160	346 aa	Predicted RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NDUFS3	O75489	264 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ANKRD34C	P0C6C1	535 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	POLR2C	P19387	275 aa	Predicted RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CD151	P48509	253 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TTPA	P49638	278 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	UCN	P55089	124 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RAB15	P59190	212 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SH3BP2	P78314	561 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PRKG2	Q13237	762 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SRSF6	Q13247	344 aa	Known RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	PAPD7	Q5XG87	772 aa	Known RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CEACAM20	Q6UY09	585 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	OOSP2	Q86WS3	158 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	KLHL7	Q8IXQ5	586 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	MCU	Q8NE86	351 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ACVR1C	Q8NER5	493 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	LCN9	Q8WX39	176 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	CCNL2	Q96S94	520 aa	Predicted RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	NRTN	Q99748	197 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	TRIM56	Q9BRZ2	755 aa	Known RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	HGH1	Q9BTY7	390 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	DDA1	Q9BW61	102 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	B3GNT4	Q9C0J1	378 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	RAB33B	Q9H082	229 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SRMS	Q9H3Y6	488 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ZNF768	Q9H5H4	540 aa	Known RBP	13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	FBXO8	Q9NRD0	319 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SAMD15	Q9P1V8	674 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	ASIC3	Q9UHC3	531 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	SAR1B	Q9Y6B6	198 aa		13.78	□□□□□ -0.2
CCHCR1-222	ENST00000507459	IGHV5-51	A0A0C4DH38	117 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	UBA6	A0AVT1	1052 aa	Predicted RBP	13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SDR42E2	A6NKP2	422 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	STMND1	H3BQB6	276 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PRMT5	O14744	637 aa	Predicted RBP	13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TOX3	O15405	576 aa	Predicted RBP	13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ARNT	P27540	789 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CD82	P27701	267 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	HSPA14	Q0VDF9	509 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PRKAA1	Q13131	559 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	MANEA	Q5SRI9	462 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	FAM208B	Q5VWN6	2430 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZFYVE26	Q68DK2	2539 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PTRHD1	Q6GMV3	140 aa	Known RBP	13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CCDC81	Q6ZN84	652 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	GPR155	Q7Z3F1	870 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	PRSS42	Q7Z5A4	293 aa		13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.77	□□□□□ -0.21
CCHCR1-222	ENST00000507459	VASH2	Q86V25	355 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms