RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SPTBN4Q9H254 2564 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 IGHV1OR21-1A0A087WYE8 117 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 A0A1W2PQM1 296 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 TRABD2BA6NFA1 517 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 PRR19A6NJB7 356 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 PRMT5O14744 637 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 LIN7AO14910 233 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 KPNA5O15131 536 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 SGTAO43765 313 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 DUX1O43812 170 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 BRAFP15056 766 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 AMD1P17707 334 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 IVDP26440 423 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 NDUFS1P28331 727 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 CD1CP29017 333 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 MAGEA3P43357 314 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 CD151P48509 253 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ITGA8P53708 1063 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 INHBCP55103 352 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ARL4CP56559 192 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 UBE2IP63279 158 aaKnown RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 C2orf54Q08AI8 447 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 CALCOCO2Q13137 446 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 SQSTM1Q13501 440 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 RPE65Q16518 533 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 LONRF1Q17RB8 773 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 WHAMMP3Q1A5X7 153 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 BBS9Q3SYG4 887 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 MAP9Q49MG5 647 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 PTRHD1Q6GMV3 140 aaKnown RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 KIAA0930Q6ICG6 404 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 HIBCHQ6NVY1 386 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 NEPROQ6NW34 567 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 TMEM71Q6P5X7 295 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 FAM83HQ6ZRV2 1179 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 TMEM26Q6ZUK4 368 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 USP53Q70EK8 1073 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 LRRC6Q86X45 466 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 LMNTD2Q8IXW0 634 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ALDH16A1Q8IZ83 802 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 LSMEM2Q8N112 164 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 MNS1Q8NEH6 495 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 GPR150Q8NGU9 434 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 GSDMBQ8TAX9 411 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 CALML6Q8TD86 181 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ASZ1Q8WWH4 475 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ELMO1Q92556 727 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 TMEM159Q96B96 161 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 LRRC39Q96DD0 335 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 FCRL3Q96P31 734 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 PANX3Q96QZ0 392 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 EBNA1BP2Q99848 306 aaKnown RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 ERP44Q9BS26 406 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 CARD6Q9BX69 1037 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 PHACTR1Q9C0D0 580 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 WWP1Q9H0M0 922 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 RAB17Q9H0T7 212 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 COG4Q9H9E3 785 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 SLC40A1Q9NP59 571 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ZNF624Q9P2J8 865 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 GMPR2Q9P2T1 348 aaKnown RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 FAM8A1Q9UBU6 413 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 GNPTGQ9UJJ9 305 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 ATXN7L1Q9ULK2 861 aaPredicted RBP7.11□□□□□ -1.27
GYPB-206ENST00000506516 PSMD13Q9UNM6 376 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 WDR37Q9Y2I8 494 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 AK5Q9Y6K8 562 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 PRSS21Q9Y6M0 314 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 FAM169AQ9Y6X4 670 aa7.11□□□□□ -1.27
GYPB-206ENST00000506516 PCNX2A6NKB5 2137 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 KNL1Q8NG31 2342 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 TP53BP1Q12888 1972 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 UBA6A0AVT1 1052 aaPredicted RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 TMEM8BA6NDV4 472 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 OR52A4PA6NMU1 304 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 D6RAR5 112 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 GOLGA8KD6RF30 607 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 H3BMM5 538 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 GOLGA8TH3BQL2 631 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 RAD51CO43502 376 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 OR1I1O60431 355 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 UBXN7O94888 489 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 SEC31AO94979 1220 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 ESR1P03372 595 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 MTHFD1P11586 935 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 PGAM1P18669 254 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 OGNP20774 298 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 CCKBRP32239 447 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 MAPK9P45984 424 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 RPL21P46778 160 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 ARCN1P48444 511 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 LIMK2P53671 638 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CLDN6P56747 220 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 CAV1Q03135 178 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 ZFP36L1Q07352 338 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 EIF3IQ13347 325 aaKnown RBP7.1□□□□□ -1.27
GYPB-206ENST00000506516 TRA2AQ13595 282 aaKnown RBP eCLIP7.1□□□□□ -1.27
GYPB-206ENST00000506516 SEMA3AQ14563 771 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 HIF1AQ16665 826 aa7.1□□□□□ -1.27
GYPB-206ENST00000506516 SYTL3Q4VX76 610 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms