RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ADARP55265 1226 aaKnown RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 EIF3BP55884 814 aaKnown RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 ARL4CP56559 192 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 C2orf54Q08AI8 447 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 CALCOCO2Q13137 446 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 WHAMMP3Q1A5X7 153 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 XKR5Q6UX68 686 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 LDB1Q86U70 411 aaPredicted RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 CILP2Q8IUL8 1156 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 LILRA3Q8N6C8 439 aaPredicted RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 SNIP1Q8TAD8 396 aaKnown RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 GSDMBQ8TAX9 411 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 ASZ1Q8WWH4 475 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 ZDHHC12Q96GR4 267 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 TRIM31Q9BZY9 425 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 RAB17Q9H0T7 212 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 P2RY12Q9H244 342 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 MVB12BQ9H7P6 319 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 C20orf96Q9NUD7 363 aaPredicted RBP16.29■□□□□ 0.2
SNCA-209ENST00000506244 PDP2Q9P2J9 529 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
SNCA-209ENST00000506244 ZCWPW2A0A1B0GU75 182 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 GOLGA8KD6RF30 607 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 GOLGA8TH3BQL2 631 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 TOX3O15405 576 aaPredicted RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 KDM1AO60341 852 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 URI1O94763 535 aaPredicted RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 TNFSF15O95150 251 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 ANKRD34CP0C6C1 535 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 HOXB3P14651 431 aaPredicted RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 TYRP1P17643 537 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 PCBP4P57723 403 aaKnown RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 CFHR1Q03591 330 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 DHX9Q08211 1270 aaKnown RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 TUBB2AQ13885 445 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 CRYMQ14894 314 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 BBS9Q3SYG4 887 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 SPANXN3Q5MJ09 141 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 DUS1LQ6P1R4 473 aaKnown RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 ZNF574Q6ZN55 896 aaPredicted RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 LPGAT1Q92604 370 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 TFGQ92734 400 aaPredicted RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 FGF11Q92914 225 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 EBNA1BP2Q99848 306 aaKnown RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 TUBB2BQ9BVA1 445 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 RAB33BQ9H082 229 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 EPHA6Q9UF33 1036 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 PISDQ9UG56 409 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 SLC24A2Q9UI40 661 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 UTP11Q9Y3A2 253 aaKnown RBP16.28■□□□□ 0.2
SNCA-209ENST00000506244 FRYQ5TBA9 3013 aa16.28■□□□□ 0.2
SNCA-209ENST00000506244 APC2O95996 2303 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 ACACAQ13085 2346 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 SLC5A10A0PJK1 596 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 RAD51CO43502 376 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 C9P02748 559 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 RPN2P04844 631 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 PDHA2P29803 388 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 RPL21P46778 160 aaKnown RBP16.27■□□□□ 0.2
SNCA-209ENST00000506244 C16orf72Q14CZ0 275 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 SNAP47Q5SQN1 464 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 TMEM164Q5U3C3 297 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 ARMC6Q6NXE6 501 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 CLEC14AQ86T13 490 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 KCNMB4Q86W47 210 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 RCBTB1Q8NDN9 531 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 RSC1A1Q92681 617 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 FCRL3Q96P31 734 aaPredicted RBP16.27■□□□□ 0.2
SNCA-209ENST00000506244 TRIM56Q9BRZ2 755 aaKnown RBP16.27■□□□□ 0.2
SNCA-209ENST00000506244 ERP44Q9BS26 406 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 B3GNT4Q9C0J1 378 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 CCDC68Q9H2F9 335 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 TRIT1Q9H3H1 467 aaKnown RBP16.27■□□□□ 0.2
SNCA-209ENST00000506244 ASCL3Q9NQ33 180 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 OGFRQ9NZT2 677 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 TMEM9Q9P0T7 183 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 WHRNQ9P202 907 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 ASF1AQ9Y294 204 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 FAM169AQ9Y6X4 670 aa16.27■□□□□ 0.2
SNCA-209ENST00000506244 PRAMEF33A0A0G2JMD5 474 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 A0A1W2PNU3 283 aaPredicted RBP16.26■□□□□ 0.19
SNCA-209ENST00000506244 CDRT15L2A8MXV6 281 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 MATN2O00339 956 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 CAPN5O15484 640 aaPredicted RBP16.26■□□□□ 0.19
SNCA-209ENST00000506244 RRP8O43159 456 aaKnown RBP16.26■□□□□ 0.19
SNCA-209ENST00000506244 ITGB6P18564 788 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 MPSTP25325 297 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 HSPA14Q0VDF9 509 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 PRKAA1Q13131 559 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 BRD3Q15059 726 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 IRGCQ6NXR0 463 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 OTOAQ7RTW8 1153 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 PRSS42Q7Z5A4 293 aa16.26■□□□□ 0.19
SNCA-209ENST00000506244 TBC1D21Q8IYX1 336 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms