RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TRMT5Q32P41 509 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 DGKKQ5KSL6 1271 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 C10orf120Q5SQS8 335 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CES4AQ5XG92 561 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 FRMPD2BQ6IN97 320 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RGMBQ6NW40 437 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MZT2AQ6P582 158 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SHQ1Q6PI26 577 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PRR23BQ6ZRT6 265 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 LRRC8DQ7L1W4 858 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ALYREFQ86V81 257 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CHERPQ8IWX8 916 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 NANOGP1Q8N7R0 232 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PRELID2Q8N945 189 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TRPV3Q8NET8 790 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 DNAJB8Q8NHS0 232 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 FBXO30Q8TB52 745 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ETNPPLQ8TBG4 499 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 DNAJB14Q8TBM8 379 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SPPL2AQ8TCT8 520 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 HTR3CQ8WXA8 447 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SYN2Q92777 582 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RELTQ969Z4 430 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 C12orf43Q96C57 262 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 BOD1Q96IK1 185 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MMP19Q99542 508 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MTG1Q9BT17 334 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RANBP3Q9H6Z4 567 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 NT5MQ9NPB1 228 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ABCB10Q9NRK6 738 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ZFP57Q9NU63 452 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 EXD2Q9NVH0 621 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 WBP1LQ9NX94 342 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 WWOXQ9NZC7 414 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 LIMD1Q9UGP4 676 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PCDHB10Q9UN67 800 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ZFR2Q9UPR6 939 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SHOC2Q9UQ13 582 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPS7Q9Y2R9 242 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 NR2E1Q9Y466 385 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PCDHB9Q9Y5E1 797 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MRPS18BQ9Y676 258 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 YLPM1P49750 1951 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 A0A0B4J293 547 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PNMA8CA0A1B0GUJ8 204 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TCRBV7S2A1N4TA0A589 114 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TFECO14948 347 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 HCRTR2O43614 444 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TSPAN6O43657 245 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SSX4O60224 188 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SMPD2O60906 423 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CDC123O75794 336 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CYP7B1O75881 506 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RASAL1O95294 804 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 BRI3O95415 125 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CAPN1P07384 714 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TYRP1P17643 537 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 HSD3B2P26439 372 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 POLR2IP36954 125 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 NNMTP40261 264 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 HTR3AP46098 478 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 IDH2P48735 452 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MAP3K7CLP57077 242 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 HNRNPKP61978 463 aaKnown RBP eCLIP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RPS7P62081 194 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RPL7AP62424 266 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PSPHP78330 225 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TEKQ02763 1124 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 FOXO1Q12778 655 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ELOAQ14241 798 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 AP5B1Q2VPB7 878 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 AKIRIN2Q53H80 203 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CCDC157Q569K6 752 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC45A4Q5BKX6 768 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 FIGNQ5HY92 759 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CST9Q5W186 159 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 UGT3A1Q6NUS8 523 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 DDX53Q86TM3 631 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CMIPQ8IY22 773 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 C7orf61Q8IZ16 206 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ARRDC1Q8N5I2 433 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 GLB1L3Q8NCI6 653 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 BPIFB6Q8NFQ5 453 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 OLIG1Q8TAK6 271 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 MTFMTQ96DP5 389 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RNF31Q96EP0 1072 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 PGM2Q96G03 612 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 CAPNS2Q96L46 248 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 HSFY1Q96LI6 401 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RBM4BQ9BQ04 359 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 DHRS4Q9BTZ2 278 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 FICDQ9BVA6 458 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RBM4Q9BWF3 364 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 WDR12Q9GZL7 423 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 ACTR6Q9GZN1 396 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 RBM22Q9NW64 420 aaKnown RBP eCLIP3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 GDAP2Q9NXN4 497 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 TAS2R1Q9NYW7 299 aa3.62□□□□□ -1.83
PCDH11X-208ENST00000504220 STMN3Q9NZ72 180 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms