RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 SRFBP1Q8NEF9 429 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 FBXO30Q8TB52 745 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 TCP10LQ8TDR4 215 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 AGAP4Q96P64 663 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 IL12RB2Q99665 862 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 S1PR5Q9H228 398 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 SAV1Q9H4B6 383 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 PIF1Q9H611 641 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF556Q9HAH1 456 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 PRDM9Q9NQV7 894 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 GRHL1Q9NZI5 618 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 TMEM216Q9P0N5 145 aa9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 PTBP2Q9UKA9 531 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-207ENST00000503974 LOC390937A0A1W2PQ73 354 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 FCHO1O14526 889 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ZBTB24O43167 697 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 XYLBO75191 536 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 EPOP01588 193 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ABCB4P21439 1286 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 TNFAIP3P21580 790 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 DDOSTP39656 456 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 GRIA1P42261 906 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 CDH15P55291 814 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PTP4A2Q12974 167 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 NME3Q13232 169 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 FASTKD3Q14CZ7 662 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 VEPH1Q14D04 833 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 RARS2Q5T160 578 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 BHLHA9Q7RTU4 235 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 DNAJB7Q7Z6W7 309 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 GPR149Q86SP6 731 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ASPGQ86U10 573 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SNX29P2Q8IUI4 249 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 OR4M2Q8NGB6 313 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PBXIP1Q96AQ6 731 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 CPXM1Q96SM3 734 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SERPINI1Q99574 410 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 NAA50Q9GZZ1 169 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 RHBGQ9H310 441 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 RANBP3Q9H6Z4 567 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 IL21Q9HBE4 155 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 FBXO6Q9NRD1 293 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 CLDND1Q9NY35 253 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PPARGC1AQ9UBK2 798 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 EXTL2Q9UBQ6 330 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 IPO11Q9UI26 975 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 DCTN4Q9UJW0 460 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC6A14Q9UN76 642 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 MED16Q9Y2X0 877 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 HRH3Q9Y5N1 445 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SYNJ2BP-COX16A0A087WUM0 186 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 A0A087X0T9 212 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 CCDC195A0A1B0GUA6 201 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ISPDA4D126 451 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 H0YJX3 145 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 DNALI1O14645 258 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PLD2O14939 933 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF780AO75290 641 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 DEAF1O75398 565 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 WDPCPO95876 746 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 GSNP06396 782 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ZDHHC11BP0C7U3 371 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 MAP4P27816 1152 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PRKAA2P54646 552 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 TMBIM6P55061 237 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PMS2P3Q13401 168 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF267Q14586 743 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF273Q14593 569 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC18A3Q16572 532 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PITRM1Q5JRX3 1037 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 PRMT9Q6P2P2 845 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 MON1BQ7L1V2 547 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 HS6ST3Q8IZP7 471 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SYCE1Q8N0S2 351 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SMRP1Q8NCR6 262 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 OR2T3Q8NH03 318 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SHKBP1Q8TBC3 707 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 FEZF2Q8TBJ5 459 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 GPR152Q8TDT2 470 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 OVCA2Q8WZ82 227 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC19A3Q9BZV2 496 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 FBXO44Q9H4M3 255 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 NMUR1Q9HB89 426 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SPATA6Q9NWH7 488 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 GMPR2Q9P2T1 348 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ADAMTS1Q9UHI8 967 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 TAGLN3Q9UI15 199 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 TRMT6Q9UJA5 497 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 NAGPAQ9UK23 515 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SCML2Q9UQR0 700 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ACTL7AQ9Y615 435 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 ANAPC1Q9H1A4 1944 aa9.47□□□□□ -0.89
PDLIM5-207ENST00000503974 A8MVJ9 347 aa9.46□□□□□ -0.89
PDLIM5-207ENST00000503974 E5RJQ4 531 aa9.46□□□□□ -0.89
PDLIM5-207ENST00000503974 CACNB4O00305 520 aaPredicted RBP9.46□□□□□ -0.89
PDLIM5-207ENST00000503974 CCL16O15467 120 aa9.46□□□□□ -0.89
PDLIM5-207ENST00000503974 PRPF4O43172 522 aaKnown RBP eCLIP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms