RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ZRANB3Q5FWF4 1079 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 C1QL3Q5VWW1 255 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 GLT6D1Q7Z4J2 308 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 MRGPREQ86SM8 312 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 RAB43Q86YS6 212 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 OR2L2Q8NH16 312 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 BLOC1S5Q8TDH9 187 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 INPP5DQ92835 1189 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 C1GALT1Q9NS00 363 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 SMOXQ9NWM0 555 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 C5AR2Q9P296 337 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 FAM153AQ9UHL3 310 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 B3GNT3Q9Y2A9 372 aa14.28□□□□□ -0.12
TRAF4-212ENST00000498540 CSMD1Q96PZ7 3565 aa14.27□□□□□ -0.12
TRAF4-212ENST00000498540 GSAPA4D1B5 854 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 H2AFZP0C0S5 128 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 MSH3P20585 1137 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 WASHC5Q12768 1159 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 PRKAA1Q13131 559 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 PRKD1Q15139 912 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-212ENST00000498540 ZNF385CQ66K41 422 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-212ENST00000498540 H2AFVQ71UI9 128 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 DAAM2Q86T65 1068 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 VSIG1Q86XK7 387 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-212ENST00000498540 OXNAD1Q96HP4 312 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-212ENST00000498540 MRGPRX2Q96LB1 330 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 MAK16Q9BXY0 300 aaKnown RBP14.27□□□□□ -0.13
TRAF4-212ENST00000498540 KLHL25Q9H0H3 589 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAF4-212ENST00000498540 HACD3Q9P035 362 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 ACSL5Q9ULC5 683 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 CAPN11Q9UMQ6 739 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 NTNG1Q9Y2I2 539 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 PKP3Q9Y446 797 aa14.27□□□□□ -0.13
TRAF4-212ENST00000498540 MDC1Q14676 2089 aaKnown RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 PCM1Q15154 2024 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 C9J4A7 227 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 MASP2O00187 686 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 BTN3A3O00478 584 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 BTN3A1O00481 513 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 ZNF749O43361 778 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SGTAO43765 313 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 KLF7O75840 302 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 PRAMEF1O95521 474 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 KRT1P04264 644 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 POLBP06746 335 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 MSL3P1P0C860 447 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 PVRP15151 417 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 PRDX3P30048 256 aaKnown RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 ADCY2Q08462 1091 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 GSE1Q14687 1217 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SLC1A5Q15758 541 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 CRB2Q5IJ48 1285 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SPOCD1Q6ZMY3 1216 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SRRM1Q8IYB3 904 aaKnown RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 PITPNM3Q9BZ71 974 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SLC7A5P2Q9GIP4 190 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 ILKAPQ9H0C8 392 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SRMSQ9H3Y6 488 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SYTL2Q9HCH5 934 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 SAE1Q9UBE0 346 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-212ENST00000498540 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 PADI2Q9Y2J8 665 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 COLEC10Q9Y6Z7 277 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 NUP210LQ5VU65 1888 aa14.26□□□□□ -0.13
TRAF4-212ENST00000498540 E7EQ34 232 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 MATN2O00339 956 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 LDB2O43679 373 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 EPOP01588 193 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 GYPCP04921 128 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 PECAM1P16284 738 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 NDUFS1P28331 727 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 FOXL2P58012 376 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 KRT33BQ14525 404 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 MYBPC3Q14896 1274 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 IQCB1Q15051 598 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 BCL7AQ4VC05 210 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 DCAF10Q5QP82 559 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 LYPLAL1Q5VWZ2 237 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 IGFL3Q6UXB1 125 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 CDHR3Q6ZTQ4 885 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 CFAP206Q8IYR0 622 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 GALNT16Q8N428 558 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 TTC13Q8NBP0 860 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ACVR1CQ8NER5 493 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 IPMKQ8NFU5 416 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ZNF398Q8TD17 642 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 LCN9Q8WX39 176 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 TRAPPC9Q96Q05 1148 aa14.25□□□□□ -0.13
TRAF4-212ENST00000498540 BARD1Q99728 777 aaKnown RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 DPH2Q9BQC3 489 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ZNF552Q9H707 407 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-212ENST00000498540 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms