RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 HEXDCQ8WVB3 486 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 ZNF501Q96CX3 271 aaPredicted RBP11.72□□□□□ -0.53
CNOT4-211ENST00000498534 CLIP3Q96DZ5 547 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 LRFN5Q96NI6 719 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 RUFY1Q96T51 708 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 SLC7A5P2Q9GIP4 190 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 CHST8Q9H2A9 424 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 LATS2Q9NRM7 1088 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 C1GALT1Q9NS00 363 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 SERTAD3Q9UJW9 196 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 SNX7Q9UNH6 387 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 AAR2Q9Y312 384 aaKnown RBP11.72□□□□□ -0.53
CNOT4-211ENST00000498534 ZNF451Q9Y4E5 1061 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 PCDHGB7Q9Y5F8 929 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 ARL5AQ9Y689 179 aa11.72□□□□□ -0.53
CNOT4-211ENST00000498534 SPTAN1Q13813 2472 aaKnown RBP11.72□□□□□ -0.53
CNOT4-211ENST00000498534 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
CNOT4-211ENST00000498534 SLC9B1P1A6NJY1 282 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 H7C0C1 242 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 GAPDHSO14556 408 aaPredicted RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 SRP72O76094 671 aaKnown RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 AGFG2O95081 481 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CRTAMO95727 393 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 PDGFAP04085 211 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 RAB40ALP0C0E4 278 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 POLR2CP19387 275 aaPredicted RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 VARSP26640 1264 aaKnown RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CA5AP35218 305 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 MAGEA1P43355 309 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 ATP5OP48047 213 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 PREPP48147 710 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 ARCN1P48444 511 aaKnown RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 KPNA2P52292 529 aaKnown RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 ADCY2Q08462 1091 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CHAF1BQ13112 559 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 GPS2Q13227 327 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 BCL7AQ4VC05 210 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CAPRIN2Q6IMN6 1127 aaKnown RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 ZNF517Q6ZMY9 492 aaPredicted RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CNGA4Q8IV77 575 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 VSTM4Q8IW00 320 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 SLC38A9Q8NBW4 561 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 ACVR1CQ8NER5 493 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 LCN9Q8WX39 176 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 ULK4Q96C45 1275 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 LRRC45Q96CN5 670 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 HAUS1Q96CS2 278 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 RBM41Q96IZ5 413 aaKnown RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 LINC00615Q96LM1 132 aaPredicted RBP11.71□□□□□ -0.53
CNOT4-211ENST00000498534 QKIQ96PU8 341 aaKnown RBP eCLIP11.71□□□□□ -0.538e-6■■■■■ 32.9
CNOT4-211ENST00000498534 FERD3LQ96RJ6 166 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 FICDQ9BVA6 458 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 NLNQ9BYT8 704 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 SRMSQ9H3Y6 488 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 MLXIPLQ9NP71 852 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 CRLS1Q9UJA2 301 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 BTRCQ9Y297 605 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
CNOT4-211ENST00000498534 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 hCG_1818297A0A087WSY0 165 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 C17orf113A0A1B0GUU1 675 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 CCDC66A2RUB6 948 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 GSAPA4D1B5 854 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 IFRD1O00458 451 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-211ENST00000498534 DPM1O60762 260 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 MFAP3LO75121 409 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
CNOT4-211ENST00000498534 TMEM63AO94886 807 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 CYP2A7P20853 494 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 GNLYP22749 145 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 HADHAP40939 763 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
CNOT4-211ENST00000498534 IL10RAQ13651 578 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 NADK2Q4G0N4 442 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 PLEKHS1Q5SXH7 462 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 PAPD7Q5XG87 772 aaKnown RBP11.7□□□□□ -0.54
CNOT4-211ENST00000498534 CPZQ66K79 652 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 DUS1LQ6P1R4 473 aaKnown RBP11.7□□□□□ -0.54
CNOT4-211ENST00000498534 FBXO38Q6PIJ6 1188 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 RANBP10Q6VN20 620 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 HPS6Q86YV9 775 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 DSELQ8IZU8 1212 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 HM13Q8TCT9 377 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 COPS8Q99627 209 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 HEMGNQ9BXL5 484 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 TLR10Q9BXR5 811 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 GBA3Q9H227 469 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 ACTR5Q9H9F9 607 aaPredicted RBP11.7□□□□□ -0.54
CNOT4-211ENST00000498534 SLAMF7Q9NQ25 335 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 POMT2Q9UKY4 750 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 TCFL5Q9UL49 500 aa11.7□□□□□ -0.54
CNOT4-211ENST00000498534 AKR1B15C9JRZ8 316 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 APOC4-APOC2K7ER74 178 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 APOC2P02655 101 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 HBQ1P09105 142 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 ATP1B2P14415 290 aaPredicted RBP11.69□□□□□ -0.54
CNOT4-211ENST00000498534 ITGALP20701 1170 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 PTMSP20962 102 aa11.69□□□□□ -0.54
CNOT4-211ENST00000498534 AGXTP21549 392 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms