RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 COLEC10Q9Y6Z7 277 aa13.54□□□□□ -0.24
CCDC58-207ENST00000498466 PCSK5Q92824 1860 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 MGAT4DA6NG13 374 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 MATN2O00339 956 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 ZNF749O43361 778 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 KLF7O75840 302 aaPredicted RBP13.53□□□□□ -0.24
CCDC58-207ENST00000498466 IGHEP01854 428 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 HBQ1P09105 142 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 MSH3P20585 1137 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 NDUFS1P28331 727 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 HADHAP40939 763 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 LMAN1P49257 510 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 SSPNQ14714 243 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 NOMO1Q15155 1222 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 NFKBIBQ15653 356 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 SLC14A2Q15849 920 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 Q6ZS92 163 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 B4GALNT4Q76KP1 1039 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 PLD5Q8N7P1 536 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 DTX3LQ8TDB6 740 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.53□□□□□ -0.24
CCDC58-207ENST00000498466 RAPGEF5Q92565 580 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 C17orf62Q9BQA9 187 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 UNKQ9C0B0 810 aaKnown RBP13.53□□□□□ -0.24
CCDC58-207ENST00000498466 SRMSQ9H3Y6 488 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 TRABDQ9H4I3 376 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 GLOD4Q9HC38 313 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC58-207ENST00000498466 GPN3Q9UHW5 284 aaPredicted RBP13.53□□□□□ -0.24
CCDC58-207ENST00000498466 OSGIN2Q9Y236 505 aa13.53□□□□□ -0.24
CCDC58-207ENST00000498466 PTRH2Q9Y3E5 179 aaKnown RBP13.53□□□□□ -0.24
CCDC58-207ENST00000498466 A0A0A6YYK5 440 aaPredicted RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 PPP1R12AO14974 1030 aaPredicted RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 PROSCO94903 275 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 MSL3P1P0C860 447 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 ST6GAL1P15907 406 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 KDELR1P24390 212 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 PRDX3P30048 256 aaKnown RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 FOLR3P41439 243 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 TNNT3P45378 269 aaPredicted RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 PDK1Q15118 436 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 ZRSR2Q15696 482 aaKnown RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 SP5Q6BEB4 398 aaPredicted RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 GLT6D1Q7Z4J2 308 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 GPR135Q8IZ08 494 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 OR2L2Q8NH16 312 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 LCN9Q8WX39 176 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 N4BP2L2Q92802 583 aaPredicted RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 KLHL25Q9H0H3 589 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 ZBTB20Q9HC78 741 aaPredicted RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 LMBRD1Q9NUN5 540 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 IL17CQ9P0M4 197 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 CTTNBP2NLQ9P2B4 639 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 PKP3Q9Y446 797 aa13.52□□□□□ -0.25
CCDC58-207ENST00000498466 BZW2Q9Y6E2 419 aaKnown RBP13.52□□□□□ -0.25
CCDC58-207ENST00000498466 A0A087X0T9 212 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 LRRD1A4D1F6 860 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 MASP2O00187 686 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 APOL1O14791 398 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 BUD23O43709 281 aaKnown RBP13.51□□□□□ -0.25
CCDC58-207ENST00000498466 POLBP06746 335 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 FAM228BP0C875 321 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 TEX44Q53QW1 395 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 C1orf189Q5VU69 101 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 ZNF385CQ66K41 422 aaPredicted RBP13.51□□□□□ -0.25
CCDC58-207ENST00000498466 NPNTQ6UXI9 565 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 KCNMB4Q86W47 210 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 MCEMP1Q8IX19 187 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 CFAP206Q8IYR0 622 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 SLC25A41Q8N5S1 370 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 ACVR1CQ8NER5 493 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 BLOC1S5Q8TDH9 187 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 NAT14Q8WUY8 206 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 RMDN2Q96LZ7 410 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 MAK16Q9BXY0 300 aaKnown RBP13.51□□□□□ -0.25
CCDC58-207ENST00000498466 P4HTMQ9NXG6 502 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 FAM153AQ9UHL3 310 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 HEBP2Q9Y5Z4 205 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 APCP25054 2843 aa13.51□□□□□ -0.25
CCDC58-207ENST00000498466 KLHL33A6NCF5 533 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 PRSS44E7EML9 344 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 ZG16O60844 167 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CBSLP0DN79 551 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 PVRP15151 417 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 GRNP28799 593 aaKnown RBP13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CBSP35520 551 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CHRNA4P43681 627 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 WNT3AP56704 352 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CYP2A13Q16696 494 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 ANO6Q4KMQ2 910 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 SLC9A4Q6AI14 798 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
CCDC58-207ENST00000498466 CDHR3Q6ZTQ4 885 aa13.5□□□□□ -0.25
CCDC58-207ENST00000498466 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms