RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CT55Q8WUE5 264 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 COPS8Q99627 209 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 FAM118BQ9BPY3 351 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 TUBB2BQ9BVA1 445 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 VPS37BQ9H9H4 285 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 FANCEQ9HB96 536 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 FGF21Q9NSA1 209 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 SLC24A2Q9UI40 661 aa11.47□□□□□ -0.57
NUDCD3-211ENST00000497978 TLN1Q9Y490 2541 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 C17orf113A0A1B0GUU1 675 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 AGAP14A8MT82 685 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 C3orf80F5H4A9 247 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 MATN2O00339 956 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 CPNE3O75131 537 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 TIAF1O95411 115 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 PRLHRP49683 370 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 ZNF140P52738 457 aaPredicted RBP11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 RPS15P62841 145 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 XIAPP98170 497 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 OLIG2Q13516 323 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 CAPRIN2Q6IMN6 1127 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 DUS1LQ6P1R4 473 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 ARHGEF18Q6ZSZ5 1173 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 KIAA1328Q86T90 577 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 TMEM126BQ8IUX1 230 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 TXLNBQ8N3L3 684 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 D2HGDHQ8N465 521 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 UBL4BQ8N7F7 174 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 ACVR1CQ8NER5 493 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 OR4E2Q8NGC2 313 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 GPR87Q9BY21 358 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 EPN3Q9H201 632 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 ARNT2Q9HBZ2 717 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 KCND1Q9NSA2 647 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 SOHLH2Q9NX45 425 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 AMFRQ9UKV5 643 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 MAN2B2Q9Y2E5 1009 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 DUSP10Q9Y6W6 482 aa11.46□□□□□ -0.57
NUDCD3-211ENST00000497978 MYO18BQ8IUG5 2567 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 IFRD1O00458 451 aaPredicted RBP11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 RFPL1O75677 317 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 SCRG1O75711 98 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 NTRK1P04629 796 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 KLK3P07288 261 aaPredicted RBP11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 POLR2CP19387 275 aaPredicted RBP11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 CDH3P22223 829 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 MC4RP32245 332 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 ZNF75DP51815 510 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 KPNA2P52292 529 aaKnown RBP11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 VAV2P52735 878 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 KLRB1Q12918 225 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 MSLNQ13421 630 aaPredicted RBP11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 SPARCL1Q14515 664 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 PARP6Q2NL67 630 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 P3H1Q32P28 736 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 ZRANB3Q5FWF4 1079 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 DENND5AQ6IQ26 1287 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 CERS6Q6ZMG9 384 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 TAS2R42Q7RTR8 314 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 PEX26Q7Z412 305 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 SYCE1Q8N0S2 351 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 NAT14Q8WUY8 206 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 LCN9Q8WX39 176 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 ALG3Q92685 438 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 RMDN2Q96LZ7 410 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 ALS2CR12Q96Q35 445 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 FERD3LQ96RJ6 166 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 REPIN1Q9BWE0 567 aaKnown RBP11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 SRMSQ9H3Y6 488 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 ACTL8Q9H568 366 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 LRRC40Q9H9A6 602 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 ZDHHC3Q9NYG2 299 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 TP53TG5Q9Y2B4 290 aa11.45□□□□□ -0.58
NUDCD3-211ENST00000497978 GSAPA4D1B5 854 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 GRID2IPA4D2P6 1211 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 MIF4GDA9UHW6 222 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 PSMD3O43242 534 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 LDB2O43679 373 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 SGTAO43765 313 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 GSTM1P09488 218 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 FURINP09958 794 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 ACRV1P26436 265 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 PTPN4P29074 926 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 ARCN1P48444 511 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 CD151P48509 253 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 PMS2P54278 862 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 GSDMDP57764 484 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 GSTM4Q03013 218 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 GPR19Q15760 415 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 TCTN3Q6NUS6 607 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 AADACL2Q6P093 401 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 LILRA3Q8N6C8 439 aaPredicted RBP11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 LRRC57Q8N9N7 239 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 FAM71DQ8N9W8 422 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 TEX19Q8NA77 164 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 THAP4Q8WY91 577 aa11.44□□□□□ -0.58
NUDCD3-211ENST00000497978 CPT1BQ92523 772 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms