RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 CDC16Q13042 620 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 TBCEQ15813 527 aaPredicted RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ZC2HC1CQ53FD0 456 aaPredicted RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ASPRV1Q53RT3 343 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ALFQ53S48 1182 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 FAM109BQ6ICB4 259 aaPredicted RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 MMS22LQ6ZRQ5 1243 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 HIST3H2AQ7L7L0 130 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 DGLUCYQ7Z3D6 616 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 TRPT1Q86TN4 253 aaKnown RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 LONP2Q86WA8 852 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 RASGEF1CQ8N431 466 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 CTCFLQ8NI51 663 aaPredicted RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 TAF15Q92804 592 aaKnown RBP eCLIP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 SEMA3CQ99985 751 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 GFRA4Q9GZZ7 299 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 POLR1BQ9H9Y6 1135 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ADPRHL2Q9NX46 363 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 RCC2Q9P258 522 aaKnown RBP3.9□□□□□ -1.79
TRIM4-205ENST00000496896 YIPF1Q9Y548 306 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 CD163L1Q9NR16 1453 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 RICTORQ6R327 1708 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 KNDC1Q76NI1 1749 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 SIGLEC1Q9BZZ2 1709 aa3.9□□□□□ -1.79
TRIM4-205ENST00000496896 ARHGEF10O15013 1369 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 KIAA0232Q92628 1395 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 NRKQ7Z2Y5 1582 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 SSH2Q76I76 1423 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 A0A0G2JLW4 131 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 NPHP1O15259 732 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 TMCC2O75069 709 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 REC8O95072 547 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 MBD3O95983 291 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 TFAP2AP05549 437 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 PRSS56P0CW18 603 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 RIPK4P57078 832 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 RPS3AP61247 264 aaKnown RBP3.89□□□□□ -1.79
TRIM4-205ENST00000496896 GNB1P62873 340 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 DUOXA1Q1HG43 343 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 LRIF1Q5T3J3 769 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 GORABQ5T7V8 394 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 SARM1Q6SZW1 724 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 TPRG1Q6ZUI0 275 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 TMTC3Q6ZXV5 915 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 ZSCAN30Q86W11 494 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 RPAP2Q8IXW5 612 aaPredicted RBP3.89□□□□□ -1.79
TRIM4-205ENST00000496896 PAF1Q8N7H5 531 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 ADAD2Q8NCV1 583 aaKnown RBP3.89□□□□□ -1.79
TRIM4-205ENST00000496896 FCAMRQ8WWV6 532 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 SMPDL3BQ92485 455 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 SYAP1Q96A49 352 aaPredicted RBP3.89□□□□□ -1.79
TRIM4-205ENST00000496896 CHMP4AQ9BY43 222 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 RRAGDQ9NQL2 400 aaPredicted RBP3.89□□□□□ -1.79
TRIM4-205ENST00000496896 MTMR6Q9Y217 621 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 AGLP35573 1532 aa3.89□□□□□ -1.79
TRIM4-205ENST00000496896 ALKQ9UM73 1620 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 MON2Q7Z3U7 1717 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 FAM237BA0A1B0GVD1 139 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 LIPT2A6NK58 231 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 ZNF500O60304 480 aaPredicted RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 HMMRO75330 724 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 ZNF853P0CG23 659 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 IGHV4-38-2P0DP08 117 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 SELLP14151 372 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 HRH2P25021 359 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 MSNP26038 577 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 ALDH4A1P30038 563 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 KRT9P35527 623 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 PIK3CAP42336 1068 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 GAGE2BQ13066 116 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 TSTQ16762 297 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 GAGE2EQ4V326 116 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 GAGE2AQ6NT46 116 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 RBMS3Q6XE24 437 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 EXOC8Q8IYI6 725 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 GBGT1Q8N5D6 347 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 C1orf52Q8N6N3 182 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 FAM184AQ8NB25 1140 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 OR8K5Q8NH50 307 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 ZNF473Q8WTR7 871 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 OXNAD1Q96HP4 312 aaPredicted RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 LRR1Q96L50 414 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 NAP1L5Q96NT1 182 aaPredicted RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 WDFY2Q96P53 400 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 MOV10L1Q9BXT6 1211 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 MUC13Q9H3R2 512 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 APOBEC3GQ9HC16 384 aaKnown RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 GAGE2DQ9UEU5 116 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 C2CD2Q9Y426 696 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 CACNA1FO60840 1977 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 N4BP2Q86UW6 1770 aaPredicted RBP3.88□□□□□ -1.79
TRIM4-205ENST00000496896 RTL1A6NKG5 1358 aa3.88□□□□□ -1.79
TRIM4-205ENST00000496896 TECPR2O15040 1411 aa3.87□□□□□ -1.79
TRIM4-205ENST00000496896 RIMS2Q9UQ26 1411 aa3.87□□□□□ -1.79
TRIM4-205ENST00000496896 SETD1AO15047 1707 aaKnown RBP3.87□□□□□ -1.79
TRIM4-205ENST00000496896 ITSN1Q15811 1721 aa3.87□□□□□ -1.79
TRIM4-205ENST00000496896 AKAP12Q02952 1782 aa3.87□□□□□ -1.79
TRIM4-205ENST00000496896 LETM1O95202 739 aaPredicted RBP3.87□□□□□ -1.79
TRIM4-205ENST00000496896 TSHBP01222 138 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms