RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 WHRNQ9P202 907 aa18.8■□□□□ 0.6
CTDSP1-213ENST00000496785 PDP2Q9P2J9 529 aa18.8■□□□□ 0.6
CTDSP1-213ENST00000496785 UNC13CQ8NB66 2214 aa18.8■□□□□ 0.6
CTDSP1-213ENST00000496785 IGHV5-10-1A0A0J9YXX1 117 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 SLC5A10A0PJK1 596 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CASC3O15234 703 aaKnown RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 RAD51CO43502 376 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 BRINP1O60477 761 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CSTF2P33240 577 aaKnown RBP eCLIP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CAPZBP47756 277 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 ERVPABLB-1P60509 514 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CRYMQ14894 314 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 LILRA3Q8N6C8 439 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 AGBL5Q8NDL9 886 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 ACVR1CQ8NER5 493 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 SPDYE1Q8NFV5 336 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 KIF18AQ8NI77 898 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 TFGQ92734 400 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 ZDHHC12Q96GR4 267 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CCDC74BQ96LY2 380 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 ZNF578Q96N58 590 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 FCRL3Q96P31 734 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CCDC68Q9H2F9 335 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 SNX24Q9Y343 169 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 LOXL2Q9Y4K0 774 aa18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 CFAP20Q9Y6A4 193 aaKnown RBP18.79■□□□□ 0.6
CTDSP1-213ENST00000496785 MN1Q10571 1320 aaPredicted RBP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 GOLGA8KD6RF30 607 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 GOLGA8TH3BQL2 631 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 TOX3O15405 576 aaPredicted RBP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 ITGA2BP08514 1039 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 RPL21P46778 160 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 PREPP48147 710 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 CAV1Q03135 178 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 FOXR1Q6PIV2 292 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 XKR5Q6UX68 686 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 ZNF574Q6ZN55 896 aaPredicted RBP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 TMPRSS9Q7Z410 1059 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 KCNMB4Q86W47 210 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 OOSP2Q86WS3 158 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 PROSER1Q86XN7 944 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 AGGF1Q8N302 714 aaeCLIP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 LPGAT1Q92604 370 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 FERD3LQ96RJ6 166 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 TRIM56Q9BRZ2 755 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 RAB33BQ9H082 229 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 EPHA6Q9UF33 1036 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 ZC3H7BQ9UGR2 993 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 SLC24A2Q9UI40 661 aa18.78■□□□□ 0.6
CTDSP1-213ENST00000496785 PIKFYVEQ9Y2I7 2098 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 CAPNS1P04632 268 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 RPN2P04844 631 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 HOXB3P14651 431 aaPredicted RBP18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 TYRP1P17643 537 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 PDHA2P29803 388 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 CCR7P32248 378 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 CFHR1Q03591 330 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 HSPA14Q0VDF9 509 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 BRD3Q15059 726 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 ST3GAL2Q16842 350 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 TBC1D25Q3MII6 688 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 ARMC6Q6NXE6 501 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 C8orf74Q6P047 294 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 DUS1LQ6P1R4 473 aaKnown RBP18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 CENPUQ71F23 418 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 OTOAQ7RTW8 1153 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 SLC46A1Q96NT5 459 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 DPH5Q9H2P9 285 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 POLG2Q9UHN1 485 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 ASF1AQ9Y294 204 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 MRFAP1Q9Y605 127 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 COMMD10Q9Y6G5 202 aa18.77■□□□□ 0.6
CTDSP1-213ENST00000496785 ACACBO00763 2458 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 E5RI56 91 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 MATN2O00339 956 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 CAPN5O15484 640 aaPredicted RBP18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 GPC4O75487 556 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 TNFSF15O95150 251 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 C9P02748 559 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 ANKRD34CP0C6C1 535 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 PKMP14618 531 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 ITGB6P18564 788 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 AOAHP28039 575 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 FMO4P31512 558 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 ELK3P41970 407 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 PRKAA1Q13131 559 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 MSS51Q4VC12 460 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 PLEKHS1Q5SXH7 462 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 TMEM164Q5U3C3 297 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 DUPD1Q68J44 220 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 TBC1D21Q8IYX1 336 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 SLC22A15Q8IZD6 547 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 FGF11Q92914 225 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 CD180Q99467 661 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 B3GNT4Q9C0J1 378 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 TRIT1Q9H3H1 467 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 OGFRQ9NZT2 677 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 TMEM9Q9P0T7 183 aa18.76■□□□□ 0.59
CTDSP1-213ENST00000496785 PISDQ9UG56 409 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms