RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FGF5P12034 268 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 FOXN2P32314 431 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 STAT5AP42229 794 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 CD151P48509 253 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 CDKN1CP49918 316 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-213ENST00000496347 SH3BP2P78314 561 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 ACVR1Q04771 509 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 SNX1Q13596 522 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 GSE1Q14687 1217 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC4-213ENST00000496347 LYPLAL1Q5VWZ2 237 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 ZNF449Q6P9G9 518 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 LILRA3Q8N6C8 439 aaPredicted RBP15.33■□□□□ 0.04
HDAC4-213ENST00000496347 SLC45A3Q96JT2 553 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 OR6C1Q96RD1 312 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 SLC12A9Q9BXP2 914 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 TLR10Q9BXR5 811 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 OR52A5Q9H2C5 316 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 CASS4Q9NQ75 786 aa15.33■□□□□ 0.04
HDAC4-213ENST00000496347 LIN7AO14910 233 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-213ENST00000496347 FGGP02679 453 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 POLBP06746 335 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 ADRA1DP25100 572 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 TUBB3Q13509 450 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 LY6DQ14210 128 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 KRT33BQ14525 404 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 ARMC6Q6NXE6 501 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 CERS6Q6ZMG9 384 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 BPHLQ86WA6 291 aaPredicted RBP15.32■□□□□ 0.04
HDAC4-213ENST00000496347 PPP1R3BQ86XI6 285 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 CLDN19Q8N6F1 224 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 SGSM3Q96HU1 749 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 CATSPER2Q96P56 530 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 TTC1Q99614 292 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 MVB12BQ9H7P6 319 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 PDE7BQ9NP56 450 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 HOMER3Q9NSC5 361 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 HRASLS2Q9NWW9 162 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 PPP2R2CQ9Y2T4 447 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 TCAF1Q9Y4C2 921 aa15.32■□□□□ 0.04
HDAC4-213ENST00000496347 IGHV5-51A0A0C4DH38 117 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 UBA6A0AVT1 1052 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 CCDC78A2IDD5 438 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 CCDC162PA2VCL2 907 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 AP3B1O00203 1094 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 ZBTB11O95625 1053 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 HSD11B2P80365 405 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 ACY1Q03154 408 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 PRKAA1Q13131 559 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 CRTC2Q53ET0 693 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 AARS2Q5JTZ9 985 aaKnown RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 TSTD2Q5T7W7 516 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 TIPARPQ7Z3E1 657 aaKnown RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 RASGRP3Q8IV61 690 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 GLIS1Q8NBF1 620 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 SIDT2Q8NBJ9 832 aaKnown RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 PPHLN1Q8NEY8 458 aaKnown RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 EXTL1Q92935 676 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 STAMBPL1Q96FJ0 436 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 FCRL4Q96PJ5 515 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 ARHGAP9Q9BRR9 750 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 SEMA4CQ9C0C4 833 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 POMT2Q9UKY4 750 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 RARRES3Q9UL19 164 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 DRG1Q9Y295 367 aaKnown RBP15.31■□□□□ 0.04
HDAC4-213ENST00000496347 MYO18BQ8IUG5 2567 aa15.31■□□□□ 0.04
HDAC4-213ENST00000496347 OR6C74A6NCV1 312 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 MT-ND3P03897 115 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 SFTPCP11686 197 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 ETS1P14921 441 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 GRIA1P42261 906 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 ARL4DP49703 201 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 TUBB4BP68371 445 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 PRAMEP78395 509 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 MC1RQ01726 317 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 PLOD1Q02809 727 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-213ENST00000496347 TUBB2AQ13885 445 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 LINC00303Q3SY05 128 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 SYTL3Q4VX76 610 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 BORAQ6PGQ7 559 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 C6orf15Q6UXA7 325 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-213ENST00000496347 D2HGDHQ8N465 521 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 OR8K5Q8NH50 307 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 LCN9Q8WX39 176 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 STARD8Q92502 1023 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 MAP3K3Q99759 626 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 TUBB2BQ9BVA1 445 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 IL22Q9GZX6 179 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 SRMSQ9H3Y6 488 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 TFB2MQ9H5Q4 396 aaKnown RBP15.3■□□□□ 0.04
HDAC4-213ENST00000496347 LNPEPQ9UIQ6 1025 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 BTRCQ9Y297 605 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 RPS6KL1Q9Y6S9 549 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 TENM4Q6N022 2769 aa15.3■□□□□ 0.04
HDAC4-213ENST00000496347 LOC101059948A0A1B0GTJ6 334 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 OR51F1A6NGY5 319 aa15.29■□□□□ 0.04
HDAC4-213ENST00000496347 KIAA0754O94854 1291 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms