RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 SPACA7Q96KW9 195 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 BMFQ96LC9 184 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 WDR92Q96MX6 357 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 NECAB3Q96P71 396 aaPredicted RBP10.81□□□□□ -0.68
PKP4-215ENST00000494945 TIMM29Q9BSF4 260 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 GATA5Q9BWX5 397 aaPredicted RBP10.81□□□□□ -0.68
PKP4-215ENST00000494945 ERVK-6Q9BXR3 956 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 TRIM54Q9BYV2 358 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 DRC3Q9H069 523 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 SLCO1B3Q9NPD5 702 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 NCKIPSDQ9NZQ3 722 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.81□□□□□ -0.68
PKP4-215ENST00000494945 GULP1Q9UBP9 304 aa10.81□□□□□ -0.68
PKP4-215ENST00000494945 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.81□□□□□ -0.68
PKP4-215ENST00000494945 GON4LQ3T8J9 2241 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CCDC163A0A0D9SF12 145 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 A0A1W2PPC4 97 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 PABPN1LA6NDY0 278 aaKnown RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 H3BM21 787 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 GFYI3L273 518 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 NDUFAB1O14561 156 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 FFAR2O15552 330 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 TGDSO95455 350 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 VCLP18206 1134 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CYP2A7P20853 494 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 RABIFP47224 123 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 HK3P52790 923 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 THOP1P52888 689 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 NAGLUP54802 743 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 ALDH18A1P54886 795 aaKnown RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 CLDN2P57739 230 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CDKL1Q00532 357 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 PFKFB4Q16877 469 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 USP39Q53GS9 565 aaKnown RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 CFAP157Q5JU67 520 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 ZNF678Q5SXM1 525 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CES4AQ5XG92 561 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 UBE2R2Q712K3 238 aaPredicted RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 GALNT13Q8IUC8 556 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CRLF3Q8IUI8 442 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 VRK3Q8IV63 474 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 OR56A4Q8NGH8 313 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 PPP4R1Q8TF05 950 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 ZNF473Q8WTR7 871 aaKnown RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 SKA2Q8WVK7 121 aaPredicted RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 ASB11Q8WXH4 323 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CNDP1Q96KN2 507 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 FOPNLQ96NB1 174 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 TMEM237Q96Q45 408 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 TRMOQ9BU70 441 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 C1QTNF3Q9BXJ4 246 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 SLC12A9Q9BXP2 914 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 FAM107BQ9H098 131 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 DPEP2Q9H4A9 486 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 EBF2Q9HAK2 575 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 PARVBQ9HBI1 364 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 CYP4F12Q9HCS2 524 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 SPATA6Q9NWH7 488 aaPredicted RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 CD274Q9NZQ7 290 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 ZNHIT2Q9UHR6 403 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
PKP4-215ENST00000494945 ADAMTS6Q9UKP5 1117 aa10.8□□□□□ -0.68
PKP4-215ENST00000494945 RALGAPA1Q6GYQ0 2036 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PRSS38A1L453 326 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 METTL12A8MUP2 240 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PSIP1O75475 530 aaKnown RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 HSPA4LO95757 839 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PDGFBP01127 241 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 CATP04040 527 aaKnown RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 HIST1H2AGP0C0S8 130 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 TROVE2P10155 538 aaKnown RBP eCLIP10.79□□□□□ -0.68
PKP4-215ENST00000494945 HIST1H2ADP20671 130 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 CD27P26842 260 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PREPP48147 710 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PXNP49023 591 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 AP1S2P56377 157 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 GALNT1Q10472 559 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 PTK2BQ14289 1009 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 NFE2L1Q14494 772 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 SETDB1Q15047 1291 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PLA2G4EQ3MJ16 856 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PYCR3Q53H96 274 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 GKAP1Q5VSY0 366 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 METRNLQ641Q3 311 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 SULT1C3Q6IMI6 304 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 METTL2BQ6P1Q9 378 aaKnown RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 XKR5Q6UX68 686 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 FRMD7Q6ZUT3 714 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PIGWQ7Z7B1 504 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 TCAIMQ8N3R3 496 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 FAM160A2Q8N612 972 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 CCNYL1Q8N7R7 359 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 FRMD1Q8N878 549 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 FBXO15Q8NCQ5 510 aaPredicted RBP10.79□□□□□ -0.68
PKP4-215ENST00000494945 MCOLN3Q8TDD5 553 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 UBTD2Q8WUN7 234 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 PHF21BQ96EK2 531 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 HIST1H2AHQ96KK5 128 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 HIST1H2AJQ99878 128 aa10.79□□□□□ -0.68
PKP4-215ENST00000494945 H2AFJQ9BTM1 129 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms