RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CBARPQ8N350 705 aaPredicted RBP11.3□□□□□ -0.6
RFC4-214ENST00000494047 SNX31Q8N9S9 440 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 OR2T12Q8NG77 320 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 DNAJB14Q8TBM8 379 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 GRIN3AQ8TCU5 1115 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 PROKR1Q8TCW9 393 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 C12orf43Q96C57 262 aaKnown RBP11.3□□□□□ -0.6
RFC4-214ENST00000494047 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
RFC4-214ENST00000494047 SLC39A3Q9BRY0 314 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 NTMT1Q9BV86 223 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 CHID1Q9BWS9 393 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 SPATA9Q9BWV2 254 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 NPLQ9BXD5 320 aaPredicted RBP11.3□□□□□ -0.6
RFC4-214ENST00000494047 CEP44Q9C0F1 390 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 P2RY12Q9H244 342 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 EPS8L2Q9H6S3 715 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 CCNB1IP1Q9NPC3 277 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 SMPD4Q9NXE4 827 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 EGFL7Q9UHF1 273 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 STOML2Q9UJZ1 356 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 SNX5Q9Y5X3 404 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 TTC3P53804 2025 aa11.3□□□□□ -0.6
RFC4-214ENST00000494047 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 SLC38A8A6NNN8 435 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 FAM220BPB1ANY3 271 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 LSM1O15116 133 aaKnown RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 PRMT3O60678 531 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 CA3P07451 260 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 CCDC159P0C7I6 412 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 CD1EP15812 388 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 HDCP19113 662 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 PRPH2P23942 346 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 NFKBIAP25963 317 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 NRIP1P48552 1158 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 DIO3P55073 304 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 FOXA1P55317 472 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 TPD52P55327 224 aaPredicted RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 DEFB103AP81534 67 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 HTRA4P83105 476 aaPredicted RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 MVKQ03426 396 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 GK3PQ14409 553 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 ADGRF1Q5T601 910 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 ERICH5Q6P6B1 374 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 IL27RAQ6UWB1 636 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 TRIM46Q7Z4K8 759 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 SNX20Q7Z614 316 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 LDB1Q86U70 411 aaPredicted RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 RIMKLAQ8IXN7 391 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 KIAA2013Q8IYS2 634 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 CLEC4FQ8N1N0 589 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 TMEM132CQ8N3T6 1108 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 HJURPQ8NCD3 748 aaPredicted RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 DDHD1Q8NEL9 900 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 LPCAT1Q8NF37 534 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 PJA1Q8NG27 643 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 ZNF566Q969W8 418 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 RNF145Q96MT1 663 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 SAMD11Q96NU1 681 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 NSUN5Q96P11 429 aaKnown RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 SLC30A3Q99726 388 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 ANKHQ9HCJ1 492 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 GIN1Q9NXP7 522 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 TRPM5Q9NZQ8 1165 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 OPTCQ9UBM4 332 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 NUDT5Q9UKK9 219 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 SAMD4AQ9UPU9 718 aaKnown RBP11.29□□□□□ -0.6
RFC4-214ENST00000494047 BTRCQ9Y297 605 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 ZNF510Q9Y2H8 683 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 MED16Q9Y2X0 877 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 KCTD3Q9Y597 815 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
RFC4-214ENST00000494047 A0A0J9YVX5 310 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ELOVL7A1L3X0 281 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SERTM1A2A2V5 107 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CDC7O00311 574 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 DLGAP1O14490 977 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 KPNA5O15131 536 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 FFAR2O15552 330 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SEC14L2O76054 403 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 ALPLP05186 524 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 POU3F3P20264 500 aaPredicted RBP11.28□□□□□ -0.6
RFC4-214ENST00000494047 OXTRP30559 389 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 GNPDA1P46926 289 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 SERPINB10P48595 397 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 HNMTP50135 292 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CLCN7P51798 805 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 PGGT1BP53609 377 aa11.28□□□□□ -0.6
RFC4-214ENST00000494047 CXCR4P61073 352 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms