RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 SLC9B1P1A6NJY1 282 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 K7EPI3 171 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 LDB2O43679 373 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ITM2AO43736 263 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ALPPP05187 535 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ALPPL2P10696 532 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ZNF20P17024 532 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 UGT1A1P22309 533 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 STX2P32856 288 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 FRKP42685 505 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 FASLGP48023 281 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 LHX1P48742 406 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 UCP2P55851 309 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 RPS13P62277 151 aaKnown RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 GHRHRQ02643 423 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TAF7Q15545 349 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 SPOUT1Q5T280 376 aaKnown RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ASPHD1Q5U4P2 390 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 C18orf63Q68DL7 685 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 BRAT1Q6PJG6 821 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ABRAXAS1Q6UWZ7 409 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 DEF8Q6ZN54 512 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 SLC16A12Q6ZSM3 486 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TMPRSS11FQ6ZWK6 438 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 FOXRED2Q8IWF2 684 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 MRPL43Q8N983 215 aaKnown RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 URGCPQ8TCY9 931 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 BICD2Q8TD16 824 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TAAR8Q969N4 342 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 SYAP1Q96A49 352 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 MOB3AQ96BX8 217 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 CMKLR1Q99788 373 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 P2RY12Q9H244 342 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TOR3AQ9H497 397 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 HHATLQ9HCP6 504 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TMEM184CQ9NVA4 438 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 MSRB1Q9NZV6 116 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 ABT1Q9ULW3 272 aaKnown RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TMEM184BQ9Y519 407 aaPredicted RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 SRPRBQ9Y5M8 271 aaKnown RBP4.53□□□□□ -1.68
VPS13A-212ENST00000493341 TEX264Q9Y6I9 313 aa4.53□□□□□ -1.68
VPS13A-212ENST00000493341 POLR2AP24928 1970 aaKnown RBP4.52□□□□□ -1.69
VPS13A-212ENST00000493341 PRSS51A0A1B0GVH4 220 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 A0A1W2PPW3 197 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 C5orf51A6NDU8 294 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 FAM90A26D6RGX4 464 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 HSPA12AO43301 675 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 SMPD2O60906 423 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 VNN2O95498 520 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 SPP1P10451 314 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 KCNA5P22460 613 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 SLC9A3P48764 834 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 RGS7P49802 495 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 TKTL1P51854 596 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 ST3GAL1Q11201 340 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 CTF1Q16619 201 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 DUSP6Q16828 381 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 HSP90AA5PQ58FG0 334 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 PRAMEF8Q5VWM4 474 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 MFSD7Q6UXD7 560 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 GPR180Q86V85 440 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 ZC3HC1Q86WB0 502 aaKnown RBP4.52□□□□□ -1.69
VPS13A-212ENST00000493341 GCSAMQ8N6F7 178 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 CNNM3Q8NE01 707 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 ACVR1CQ8NER5 493 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 OR2AK2Q8NG84 335 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 APOLD1Q96LR9 279 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 ZNF582Q96NG8 517 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-212ENST00000493341 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 HSD3B7Q9H2F3 369 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 FOXP1Q9H334 677 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-212ENST00000493341 ZBTB40Q9NUA8 1239 aa4.52□□□□□ -1.69
VPS13A-212ENST00000493341 RCC2Q9P258 522 aaKnown RBP4.52□□□□□ -1.69
VPS13A-212ENST00000493341 A0A0G2JK05 382 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 C13orf42A0A1B0GVH6 325 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 MAGEA13PA6NCF6 341 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 TMEM221A6NGB7 291 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 TRIM64CA6NLI5 447 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 H0YGN5 161 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 PLOD2O00469 737 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 HMMRO75330 724 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 LUC7L3O95232 432 aaKnown RBP4.51□□□□□ -1.69
VPS13A-212ENST00000493341 HEXBP07686 556 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 C8orf89P0DMQ9 161 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 HOXA11P31270 313 aaPredicted RBP4.51□□□□□ -1.69
VPS13A-212ENST00000493341 SERPINH1P50454 418 aaKnown RBP4.51□□□□□ -1.69
VPS13A-212ENST00000493341 HNRNPH2P55795 449 aaKnown RBP4.51□□□□□ -1.69
VPS13A-212ENST00000493341 TAS2R38P59533 333 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 GMFBP60983 142 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 TFF2Q03403 129 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 TROAPQ12815 778 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 MAPK11Q15759 364 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 GCNT6Q5T4J0 391 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 FCRLBQ6BAA4 426 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 CYB5D1Q6P9G0 228 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 ZCCHC12Q6PEW1 402 aa4.51□□□□□ -1.69
VPS13A-212ENST00000493341 TTLL10Q6ZVT0 673 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms