RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 DEFB124Q8NES8 71 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 CD200R1Q8TD46 325 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 INPP5DQ92835 1189 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 TMEM159Q96B96 161 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 TSPAN17Q96FV3 270 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 WWP1Q9H0M0 922 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 CENPHQ9H3R5 247 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 PRDM8Q9NQV8 689 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 TAAR2Q9P1P5 351 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 GULP1Q9UBP9 304 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 FETUBQ9UGM5 382 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 NFS1Q9Y697 457 aa16.85■□□□□ 0.29
LIME1-208ENST00000493265 IQANK1A0A1B0GTG1 560 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 C17orf113A0A1B0GUU1 675 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 B4DGG1 531 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 LIN7AO14910 233 aaPredicted RBP16.84■□□□□ 0.29
LIME1-208ENST00000493265 KPNA5O15131 536 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 YY2O15391 372 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 STMN1P16949 149 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 PDHA2P29803 388 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 GMPRP36959 345 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 CLCNKAP51800 687 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 ZNF844Q08AG5 666 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 ACSBG2Q5FVE4 666 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 PAQR3Q6TCH7 311 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 HDXQ7Z353 690 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 VRK3Q8IV63 474 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 CYP4X1Q8N118 509 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 ASZ1Q8WWH4 475 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 RUFY1Q96T51 708 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 DPEP2Q9H4A9 486 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 GPAMQ9HCL2 828 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 SIRPGQ9P1W8 387 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 TBC1D29Q9UFV1 150 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 DHRS7Q9Y394 339 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 PIKFYVEQ9Y2I7 2098 aa16.84■□□□□ 0.29
LIME1-208ENST00000493265 AKAP13Q12802 2813 aa16.83■□□□□ 0.29
LIME1-208ENST00000493265 ASPMQ8IZT6 3477 aa16.83■□□□□ 0.29
LIME1-208ENST00000493265 SLC5A10A0PJK1 596 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 TPP1O14773 563 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 KCNJ13O60928 360 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 CDH16O75309 829 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 TCEA3O75764 348 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 EML2O95834 649 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 GSTM1P09488 218 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 SLC35G4P0C7Q5 338 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 CEACAM1P13688 526 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 KRT15P19012 456 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 CSRP1P21291 193 aaKnown RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 CNTFP26441 200 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 TYK2P29597 1187 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 SKIV2L2P42285 1042 aaKnown RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 SERPINB8P50452 374 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 RAB10P61026 200 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 GSTM4Q03013 218 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 DMPKQ09013 629 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 ILF2Q12905 390 aaKnown RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 ABRQ12979 859 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 TTLL9Q3SXZ7 439 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 ZNF658BQ4V348 819 aaPredicted RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 METRNLQ641Q3 311 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 SFTPA2Q8IWL1 248 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 CFAP61Q8NHU2 1237 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 EEF1AKMT1Q8WVE0 214 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 UNKQ9C0B0 810 aaKnown RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 VPS11Q9H270 941 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 PPCSQ9HAB8 311 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
LIME1-208ENST00000493265 SNX15Q9NRS6 342 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 WASF3Q9UPY6 502 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 WDR37Q9Y2I8 494 aa16.83■□□□□ 0.28
LIME1-208ENST00000493265 KLHL33A6NCF5 533 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 NEMP2A6NFY4 417 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 LMO7DNF2Z398 122 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 YKT6O15498 198 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 ALDOAP04075 364 aaKnown RBP16.82■□□□□ 0.28
LIME1-208ENST00000493265 PLEKHS1Q5SXH7 462 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 LRIG3Q6UXM1 1119 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 TDRPQ86YL5 185 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 SAP25Q8TEE9 199 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 ZDHHC1Q8WTX9 485 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 PATE1Q8WXA2 126 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 LINGO1Q96FE5 620 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 SCNM1Q9BWG6 230 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 TLK1Q9UKI8 766 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 ACSL5Q9ULC5 683 aa16.82■□□□□ 0.28
LIME1-208ENST00000493265 RUVBL2Q9Y230 463 aaKnown RBP16.82■□□□□ 0.28
LIME1-208ENST00000493265 CFAP20Q9Y6A4 193 aaKnown RBP16.82■□□□□ 0.28
LIME1-208ENST00000493265 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
LIME1-208ENST00000493265 GOLGA8RI6L899 631 aa16.81■□□□□ 0.28
LIME1-208ENST00000493265 GPC4O75487 556 aa16.81■□□□□ 0.28
LIME1-208ENST00000493265 MT-ND3P03897 115 aa16.81■□□□□ 0.28
LIME1-208ENST00000493265 CRABP2P29373 138 aa16.81■□□□□ 0.28
LIME1-208ENST00000493265 HALP42357 657 aa16.81■□□□□ 0.28
LIME1-208ENST00000493265 RGS4P49798 205 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms