RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 A1L4Q6 167 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 LILRA5A6NI73 299 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 DAPK3O43293 454 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 CEP104O60308 925 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 SNX3O60493 162 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 KATNA1O75449 491 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 FAM153BP0C7A2 387 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 MAGEA1P43355 309 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 CLCN2P51788 898 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 STC1P52823 247 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 MAGOHP61326 146 aaKnown RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 MAMLD1Q13495 774 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 DNASE1L3Q13609 305 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 IL11RAQ14626 422 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 MYBPC3Q14896 1274 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 FAM153CQ494X1 144 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 NADK2Q4G0N4 442 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 RALGPS1Q5JS13 557 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 ARMC12Q5T9G4 340 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 ZNF787Q6DD87 383 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 LYSMD3Q7Z3D4 306 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 SLC9B2Q86UD5 537 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 PLXDC1Q8IUK5 500 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 MAGOHBQ96A72 148 aaKnown RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 OR6C1Q96RD1 312 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 CENPKQ9BS16 269 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 HERPUD2Q9BSE4 406 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 TLR10Q9BXR5 811 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 INTS9Q9NV88 658 aaKnown RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 CNOT8Q9UFF9 292 aaKnown RBP12.91□□□□□ -0.34
HDAC3-213ENST00000492506 FAM153AQ9UHL3 310 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 KCND3Q9UK17 655 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 ZNF148Q9UQR1 794 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 SLC30A1Q9Y6M5 507 aa12.91□□□□□ -0.34
HDAC3-213ENST00000492506 OTOGQ6ZRI0 2925 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 KIR2DS5A0A0G2JLQ3 304 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 A0A0G2JNG1 304 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 A0A0J9YYE9 177 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 PIPSLA2A3N6 862 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 WIPF3A6NGB9 483 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 KIR2DS3K7RE56 304 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 BIRC5O15392 142 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 E2F6O75461 281 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 ASMTLO95671 621 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 TRBC1P01850 177 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 FGF5P12034 268 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 ACP5P13686 325 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 CPA3P15088 417 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 PSMA2P25787 234 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 COL8A1P27658 744 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 MIPP30301 263 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 VHLP40337 213 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 OCRLQ01968 901 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 KIR2DS5Q14953 304 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 ACAD10Q6JQN1 1059 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 PSTKQ8IV42 348 aaKnown RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 CT55Q8WUE5 264 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 SEC14L1Q92503 715 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 ZNF653Q96CK0 615 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 ZNF768Q9H5H4 540 aaKnown RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 UCK1Q9HA47 277 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 TAS2R14Q9NYV8 317 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 RCOR3Q9P2K3 495 aaPredicted RBP12.9□□□□□ -0.34
HDAC3-213ENST00000492506 CAPN6Q9Y6Q1 641 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 FBN2P35556 2912 aa12.9□□□□□ -0.34
HDAC3-213ENST00000492506 OR5K4A6NMS3 321 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 FADS2P1A8MWK0 482 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 TCP11X1B4DZS4 312 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 AKR1B10O60218 316 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 SNX2O60749 519 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 SPAG6O75602 509 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 UBOX5O94941 541 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 TIAF1O95411 115 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 CLDN1O95832 211 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 ZNF30P17039 623 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 TYRP1P17643 537 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 DCTP40126 519 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
HDAC3-213ENST00000492506 SEPHS1P49903 392 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 ZNF135P52742 658 aaPredicted RBP12.89□□□□□ -0.35
HDAC3-213ENST00000492506 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
HDAC3-213ENST00000492506 PRR30Q53SZ7 412 aaPredicted RBP12.89□□□□□ -0.35
HDAC3-213ENST00000492506 CPZQ66K79 652 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 PLEKHA7Q6IQ23 1121 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 RASGRP3Q8IV61 690 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 UBLCP1Q8WVY7 318 aaPredicted RBP12.89□□□□□ -0.35
HDAC3-213ENST00000492506 C17orf50Q8WW18 174 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 ELMO2Q96JJ3 720 aa12.89□□□□□ -0.35
HDAC3-213ENST00000492506 KRT12Q99456 494 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms