RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 HSD17B1P14061 328 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 B4GALNT1Q00973 533 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 LAPTM5Q13571 262 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 NHSL2Q5HYW2 709 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 LCN8Q6JVE9 175 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 RETSATQ6NUM9 610 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 CRTC1Q6UUV9 634 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 SNX20Q7Z614 316 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 CARM1Q86X55 608 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 AHI1Q8N157 1196 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 C10orf111Q8N326 155 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF786Q8N393 782 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 DTWD1Q8N5C7 304 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 ZBTB2Q8N680 514 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 MAGEE2Q8TD90 523 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 TOP1MTQ969P6 601 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 CCT7Q99832 543 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 C1QTNF3Q9BXJ4 246 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 NUSAP1Q9BXS6 441 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 CARS2Q9HA77 564 aaKnown RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 AGPAT4Q9NRZ5 378 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 OLAHQ9NV23 265 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 HECAQ9UBI9 543 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 LEF1Q9UJU2 399 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-220ENST00000492280 NEUROG3Q9Y4Z2 214 aa12.23□□□□□ -0.45
HMGN1-220ENST00000492280 PLXNB3Q9ULL4 1909 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 LRATO95237 230 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 CAPNS1P04632 268 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SRCP12931 536 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 NFKBIAP25963 317 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
HMGN1-220ENST00000492280 AP1S1P61966 158 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 INPP5AQ14642 412 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 PLCL1Q15111 1095 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SPANXN4Q5MJ08 99 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SUSD1Q6UWL2 747 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SPRED2Q7Z698 418 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 ZFAND4Q86XD8 727 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 RBFAQ8N0V3 343 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 NAT16Q8N8M0 369 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 FBXO30Q8TB52 745 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SCAMP4Q969E2 229 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 ASIC4Q96FT7 647 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 RIC8BQ9NVN3 520 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 THEGQ9P2T0 379 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 HCFC2Q9Y5Z7 792 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 DENND4CQ5VZ89 1909 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 TCRBV5S2A0A599 114 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 NEDD8-MDP1E9PL57 170 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 TMX2-CTNND1H3BSU7 103 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 RAD51BO15315 384 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 AP1G1O43747 822 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 RFPL2O75678 378 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 GNRH1P01148 92 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF23P17027 643 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 ROR2Q01974 943 aaKnown RBP12.22□□□□□ -0.45
HMGN1-220ENST00000492280 PRKG2Q13237 762 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 APOFQ13790 326 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 RAB33AQ14088 237 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 CRY1Q16526 586 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 CDKN3Q16667 212 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 TPGS2Q68CL5 300 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 DPY19L3Q6ZPD9 716 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SPATA19Q7Z5L4 167 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 TMEM25Q86YD3 366 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 TMEM126BQ8IUX1 230 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 HS3ST5Q8IZT8 346 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 LIX1Q8N485 282 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 LMNTD1Q8N9Z9 388 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 FIG4Q92562 907 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 UHRF1Q96T88 793 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-220ENST00000492280 FAM126AQ9BYI3 521 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF696Q9H7X3 374 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 GNPTGQ9UJJ9 305 aa12.22□□□□□ -0.45
HMGN1-220ENST00000492280 SNAP29O95721 258 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 EFNA1P20827 205 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-220ENST00000492280 FASP25445 335 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 IRX1P78414 480 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-220ENST00000492280 SF1Q15637 639 aaKnown RBP12.21□□□□□ -0.45
HMGN1-220ENST00000492280 DLEU7Q6UYE1 221 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-220ENST00000492280 STK40Q8N2I9 435 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 TSPAN14Q8NG11 270 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 MRPS31Q92665 395 aaKnown RBP12.21□□□□□ -0.45
HMGN1-220ENST00000492280 BIRC7Q96CA5 298 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 ADI1Q9BV57 179 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 OSBPL11Q9BXB4 747 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 SLC46A2Q9BY10 475 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 TRIM54Q9BYV2 358 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 TMEM39AQ9NV64 488 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 STOML2Q9UJZ1 356 aa12.21□□□□□ -0.45
HMGN1-220ENST00000492280 ZNF490Q9ULM2 529 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-220ENST00000492280 TRANK1O15050 2925 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 FAM234BA2RU67 622 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 LEFTY2O00292 366 aa12.21□□□□□ -0.46
HMGN1-220ENST00000492280 GFRA2O00451 464 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms