RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 GRHL3Q8TE85 626 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 FAM222BQ8WU58 562 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ZNRF4Q8WWF5 429 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 DAZLQ92904 295 aaKnown RBP3.31□□□□□ -1.88
HMGN1-218ENST00000490032 MYADMQ96S97 322 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 DDOQ99489 341 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 SLC26A6Q9BXS9 759 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 DIAPH3Q9NSV4 1193 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 PAG1Q9NWQ8 432 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 SESN1Q9Y6P5 492 aa3.31□□□□□ -1.88
HMGN1-218ENST00000490032 ASTN2O75129 1339 aaPredicted RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 A0A1W2PR77 199 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 MED19A0JLT2 244 aaPredicted RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 FRMD3A2A2Y4 597 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 SERINC4A6NH21 518 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 B4E171 279 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 ZNF197O14709 1029 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 ATP6V0E1O15342 81 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 KHDRBS3O75525 346 aaKnown RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 RNASEH2AO75792 299 aaKnown RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 LAMP2P13473 410 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 RARGP13631 454 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 TSPAN7P41732 249 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 PSMC4P43686 418 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 KLHL35Q6PF15 583 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 TRIM65Q6PJ69 517 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 MMS22LQ6ZRQ5 1243 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 CLEC17AQ6ZS10 378 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 Q6ZSR9 355 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 MCEMP1Q8IX19 187 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 CPSF7Q8N684 471 aaKnown RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 OR2T11Q8NH01 316 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 TBC1D16Q8TBP0 767 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 HPSE2Q8WWQ2 592 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 PGAM5Q96HS1 289 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 CMTM3Q96MX0 182 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 ABHD6Q9BV23 337 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 FGFBP2Q9BYJ0 223 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 UNC45AQ9H3U1 944 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 SH2D4AQ9H788 454 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 HHATLQ9HCP6 504 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 NPAP1Q9NZP6 1156 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 AMACRQ9UHK6 382 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 PNMA2Q9UL42 364 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 CORO1CQ9ULV4 474 aaPredicted RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 LYVE1Q9Y5Y7 322 aa3.3□□□□□ -1.88
HMGN1-218ENST00000490032 SPIN1Q9Y657 262 aaPredicted RBP3.3□□□□□ -1.88
HMGN1-218ENST00000490032 A0A1W2PN81 502 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 ELOVL7A1L3X0 281 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 E9PQ18 207 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 PIGNO95427 931 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 TBX18O95935 607 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 EFNA1P20827 205 aaPredicted RBP3.29□□□□□ -1.88
HMGN1-218ENST00000490032 CHMP24386 653 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 PON1P27169 355 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 NMBRP28336 390 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 CHRNA7P36544 502 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 SLC6A12P48065 614 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 PPP2R2BQ00005 443 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 PNRC1Q12796 327 aaPredicted RBP3.29□□□□□ -1.88
HMGN1-218ENST00000490032 IKQ13123 557 aaPredicted RBP3.29□□□□□ -1.88
HMGN1-218ENST00000490032 DCAF10Q5QP82 559 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 CYP4A22Q5TCH4 519 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 KIAA0930Q6ICG6 404 aaPredicted RBP3.29□□□□□ -1.88
HMGN1-218ENST00000490032 CORO6Q6QEF8 472 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 SCYL3Q8IZE3 742 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 SPAG16Q8N0X2 631 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 DNAJC22Q8N4W6 341 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 OR1J1Q8NGS3 322 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 C18orf12Q96KH6 178 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 PSMD1Q99460 953 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 LAT2Q9GZY6 243 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 DNAJC18Q9H819 358 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 KAT14Q9H8E8 782 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 SLC7A10Q9NS82 523 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 INTS9Q9NV88 658 aaKnown RBP3.29□□□□□ -1.88
HMGN1-218ENST00000490032 RNF186Q9NXI6 227 aa3.29□□□□□ -1.88
HMGN1-218ENST00000490032 EXO1Q9UQ84 846 aaKnown RBP3.29□□□□□ -1.88
HMGN1-218ENST00000490032 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 PRSS51A0A1B0GVH4 220 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 A0A1W2PRB8 838 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 E9PI62 339 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 TO15178 435 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 PRLRP16471 622 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 GABRB1P18505 474 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 SNRPEP62304 92 aaKnown RBP3.28□□□□□ -1.88
HMGN1-218ENST00000490032 MPP1Q00013 466 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 CDR2Q01850 454 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 SP3Q02447 781 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 ALFQ53S48 1182 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 XKR6Q5GH73 641 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 GRTP1Q5TC63 336 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 SNX30Q5VWJ9 437 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 TMEM154Q6P9G4 183 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 LSMEM2Q8N112 164 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 ANKRD52Q8NB46 1076 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 TMEM178AQ8NBL3 297 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 IWS1Q96ST2 819 aa3.28□□□□□ -1.88
HMGN1-218ENST00000490032 ITPAQ9BY32 194 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms