RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SLC16A6O15403 523 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RGS5O15539 181 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SSX4O60224 188 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KPNA6O60684 536 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PLA2G6O60733 806 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PPM1BO75688 479 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 LRIG2O94898 1065 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RETP07949 1114 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM86B2P0C5J1 330 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PGAM1P18669 254 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RAB3AP20336 220 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MSH3P20585 1137 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CHMP24386 653 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PSMB9P28065 219 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RPL9P32969 192 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SREBF1P36956 1147 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MAP2K4P45985 399 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CPT1AP50416 773 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TPMTP51580 245 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ARHGDIAP52565 204 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 EIF6P56537 245 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RAB25P57735 213 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CD83Q01151 205 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 IL1RL1Q01638 556 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PTPN11Q06124 597 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RUNX1T1Q06455 604 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP24A1Q07973 514 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RGS1Q08116 209 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CCINQ13939 588 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FRG1Q14331 258 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AANATQ16613 207 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ARMCX4Q5H9R4 360 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ZC3H12BQ5HYM0 836 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PITRM1Q5JRX3 1037 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF691Q5VV52 312 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 LAMTOR1Q6IAA8 161 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM81Q6P7N7 255 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KIAA1324Q6UXG2 1013 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 C15orf39Q6ZRI6 1047 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 C16orf62Q7Z3J2 963 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FAM160B2Q86V87 743 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PROSER1Q86XN7 944 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ZDHHC13Q8IUH4 622 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CDH26Q8IXH8 852 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RDH10Q8IZV5 341 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 OR8H2Q8N162 312 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MPP5Q8N3R9 675 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TMEM151AQ8N4L1 468 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CPA6Q8N4T0 437 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ARFGAP1Q8N6T3 406 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 EMC1Q8N766 993 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CCNYL1Q8N7R7 359 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 YIPF7Q8N8F6 280 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NAT16Q8N8M0 369 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KBTBD8Q8NFY9 601 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 OR8H1Q8NGG4 311 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ENKURQ8TC29 256 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TRPM4Q8TD43 1214 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NSUN6Q8TEA1 469 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF606Q8WXB4 792 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SMG7Q92540 1137 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 UFD1Q92890 307 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PTP4A1Q93096 173 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FBXW5Q969U6 566 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AP2M1Q96CW1 435 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 AHCYL2Q96HN2 611 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 DCLRE1CQ96SD1 692 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MBOAT4Q96T53 435 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC30A3Q99726 388 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CNPY3Q9BT09 278 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PI4K2AQ9BTU6 479 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 TTLL2Q9BWV7 592 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 HDHD5Q9BXW7 423 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ACE2Q9BYF1 805 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SPNS1Q9H2V7 528 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CRISPLD1Q9H336 500 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MEAF6Q9HAF1 191 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CYP3A43Q9HB55 503 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CCNB1IP1Q9NPC3 277 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ENTPD7Q9NQZ7 604 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CMTM6Q9NX76 183 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 MTMR4Q9NYA4 1195 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ACTR10Q9NZ32 417 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 GGA3Q9NZ52 723 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 COQ3Q9NZJ6 369 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ZNF224Q9NZL3 707 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 BFARQ9NZS9 450 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 CCDC167Q9P0B6 97 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 FNIP2Q9P278 1114 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 KIF17Q9P2E2 1029 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SRRDQ9UH36 339 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ADGRE2Q9UHX3 823 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 NUDT5Q9UKK9 219 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 ELF5Q9UKW6 265 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 RIMKLBQ9ULI2 386 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 SNX6Q9UNH7 406 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PCDHA1Q9Y5I3 950 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 PSAT1Q9Y617 370 aa4.7□□□□□ -1.66
SNRNP40-206ENST00000489853 A0A075B6Q4 140 aa4.69□□□□□ -1.66
SNRNP40-206ENST00000489853 LOC100130705A0A1B0GUX0 176 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms