RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 ATP1A1P05023 1023 aaKnown RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CSF2RAP15509 400 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 PFKFB1P16118 471 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 MCCP23508 829 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CCR3P51677 355 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 GAS1P54826 345 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 ERVFC1-1P60608 527 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 ALCAMQ13740 583 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 IL11RAQ14626 422 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 KIR2DS5Q14953 304 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 NR1D2Q14995 579 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 DUOXA1Q1HG43 343 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 SIRPB2Q5JXA9 342 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 RPUSD3Q6P087 351 aaKnown RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 PLXDC2Q6UX71 529 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 PACS1Q6VY07 963 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 ZNF852Q6ZMS4 543 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 PLPPR4Q7Z2D5 763 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CAMKMTQ7Z624 323 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 DMBX1Q8NFW5 382 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 OR10S1Q8NGN2 331 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 OR2AJ1Q8NGZ0 328 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 EXD1Q8NHP7 514 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CFAP61Q8NHU2 1237 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 TEKT4Q8WW24 435 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 NXNL1Q96CM4 212 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 PGAP3Q96FM1 320 aaPredicted RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CNDP2Q96KP4 475 aaKnown RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 MS4A10Q96PG2 267 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 C16orf70Q9BSU1 422 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 RABEP2Q9H5N1 569 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 STK26Q9P289 416 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 RHCGQ9UBD6 479 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CFDP1Q9UEE9 299 aaPredicted RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 FAF1Q9UNN5 650 aaPredicted RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 ZNF541Q9H0D2 1346 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 DOCK7Q96N67 2140 aa3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 CDK12Q9NYV4 1490 aaPredicted RBP3.35□□□□□ -1.87
AC055855.1-201ENST00000489563 IGLV5-45A0A087WSX0 123 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 TRBC2A0A5B9 178 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 MED19A0JLT2 244 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 CTAGE9A4FU28 777 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 C5orf60A6NFR6 353 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 HEPACAM2A8MVW5 462 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 UBE2CO00762 179 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 DKC1O60832 514 aaKnown RBP eCLIP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 PDE9AO76083 593 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 GCNT3O95395 438 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 APOA4P06727 396 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 H1F0P07305 194 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 CTAGE8P0CG41 777 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 MYBL1P10243 752 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 CKMT2P17540 419 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 AMD1P17707 334 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 EEF1DP29692 281 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 HOXA1P49639 335 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 MMP15P51511 669 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 ZNF75DP51815 510 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 PITX1P78337 314 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 RPL36AP83881 106 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 KRTAP1-1Q07627 177 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 PRKAA1Q13131 559 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 KYNUQ16719 465 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 RUSC1-AS1Q66K80 236 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 WBP2NLQ6ICG8 309 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 KRT80Q6KB66 452 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 GDPD4Q6W3E5 623 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 FOXL2NBQ6ZUU3 175 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 C9orf139Q6ZV77 190 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 PIWIL4Q7Z3Z4 852 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 CTAGE4Q8IX94 777 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 DCP1BQ8IZD4 617 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 TTC30BQ8N4P2 665 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 TC2NQ8N9U0 490 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 ZBTB8BQ8NAP8 495 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 PAPD5Q8NDF8 572 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 DAZLQ92904 295 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 ZNF830Q96NB3 372 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 ZNF583Q96ND8 569 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 CTAGE1Q96RT6 745 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 EPYCQ99645 322 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 OLFM1Q99784 485 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 BAG1Q99933 345 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 SLX1AQ9BQ83 275 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 TBC1D17Q9HA65 648 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 UPF2Q9HAU5 1272 aaKnown RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 EQTNQ9NQ60 294 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 CCDC177Q9NQR7 707 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 OLAHQ9NV23 265 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 SLC38A7Q9NVC3 462 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 DONSONQ9NYP3 566 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 PTTG2Q9NZH5 202 aa3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 SPIN1Q9Y657 262 aaPredicted RBP3.34□□□□□ -1.87
AC055855.1-201ENST00000489563 NAV2Q8IVL1 2488 aa3.34□□□□□ -1.88
AC055855.1-201ENST00000489563 BDP1A6H8Y1 2624 aa3.34□□□□□ -1.88
AC055855.1-201ENST00000489563 MED14O60244 1454 aa3.34□□□□□ -1.88
AC055855.1-201ENST00000489563 SMARCA4P51532 1647 aa3.33□□□□□ -1.88
AC055855.1-201ENST00000489563 FLNBO75369 2602 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms