RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NFU1Q9UMS0 254 aa14.09□□□□□ -0.15
HLA-F-229ENST00000489502 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
HLA-F-229ENST00000489502 AKAP13Q12802 2813 aa14.09□□□□□ -0.15
HLA-F-229ENST00000489502 TCRBV9S1A1TA0A576 114 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 D6RAR5 112 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 E5RI56 91 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 B4GAT1O43505 415 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 XRCC1P18887 633 aaPredicted RBP14.08□□□□□ -0.16
HLA-F-229ENST00000489502 AOAHP28039 575 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 GABRB3P28472 473 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 CSF2RBP32927 897 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 ADARP55265 1226 aaKnown RBP14.08□□□□□ -0.16
HLA-F-229ENST00000489502 RPA4Q13156 261 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 CUL1Q13616 776 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 SPIDRQ14159 915 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 GPR18Q14330 331 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 FRG1Q14331 258 aaKnown RBP14.08□□□□□ -0.16
HLA-F-229ENST00000489502 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.16
HLA-F-229ENST00000489502 MAP9Q49MG5 647 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 NKAIN2Q5VXU1 208 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 CAPRIN2Q6IMN6 1127 aaKnown RBP14.08□□□□□ -0.16
HLA-F-229ENST00000489502 GIMAP7Q8NHV1 300 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 SLC38A3Q99624 504 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 HGH1Q9BTY7 390 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 FAM129AQ9BZQ8 928 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 CCDC68Q9H2F9 335 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 LRRN3Q9H3W5 708 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 MOCS1Q9NZB8 636 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 RUVBL2Q9Y230 463 aaKnown RBP14.08□□□□□ -0.16
HLA-F-229ENST00000489502 MED16Q9Y2X0 877 aa14.08□□□□□ -0.16
HLA-F-229ENST00000489502 IGHV1OR21-1A0A087WYE8 117 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 LILRA5A6NI73 299 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 CXorf49A8MYA2 514 aaPredicted RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 H3BMM5 538 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 IFRD1O00458 451 aaPredicted RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 APOA4P06727 396 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 PNLIPP16233 465 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 CHRM3P20309 590 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 LEPRP48357 1165 aaKnown RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 CD151P48509 253 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 PDX1P52945 283 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 E2F1Q01094 437 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 ZNF449Q6P9G9 518 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 KIAA0408Q6ZU52 694 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 TMEM26Q6ZUK4 368 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 OTOAQ7RTW8 1153 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 ERMP1Q7Z2K6 904 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 TMPRSS9Q7Z410 1059 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 PIM3Q86V86 326 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 IFT20Q8IY31 132 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 SLC22A15Q8IZD6 547 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 ZBTB2Q8N680 514 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 AVL9Q8NBF6 648 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 SIDT2Q8NBJ9 832 aaKnown RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 GABPB2Q8TAK5 448 aaPredicted RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 GFM1Q96RP9 751 aaKnown RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 SLC30A3Q99726 388 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 NUDT22Q9BRQ3 303 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 AARSD1Q9BTE6 412 aaKnown RBP14.07□□□□□ -0.16
HLA-F-229ENST00000489502 RDH14Q9HBH5 336 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 LRRC4CQ9HCJ2 640 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 SLC40A1Q9NP59 571 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 WASF3Q9UPY6 502 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 CDYLQ9Y232 598 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 KNTC1P50748 2209 aa14.07□□□□□ -0.16
HLA-F-229ENST00000489502 KIF26BQ2KJY2 2108 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 CHD8Q9HCK8 2581 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 NTN3O00634 580 aaPredicted RBP14.06□□□□□ -0.16
HLA-F-229ENST00000489502 GPC4O75487 556 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 MT-CO3P00414 261 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 C1QAP02745 245 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 AHSGP02765 367 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 CDK4P11802 303 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 GPR3P46089 330 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 PGGT1BP53609 377 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 PLCL1Q15111 1095 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 KYNUQ16719 465 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 CDCP2Q5VXM1 449 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 RBM44Q6ZP01 1051 aaKnown RBP14.06□□□□□ -0.16
HLA-F-229ENST00000489502 C3orf62Q6ZUJ4 267 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 STRA8Q7Z7C7 330 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 B3GNT8Q7Z7M8 397 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 GPATCH11Q8N954 259 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 PHC3Q8NDX5 983 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 OR5AR1Q8NGP9 310 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 ASZ1Q8WWH4 475 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 RSC1A1Q92681 617 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 TFGQ92734 400 aaPredicted RBP14.06□□□□□ -0.16
HLA-F-229ENST00000489502 SH3KBP1Q96B97 665 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 GPR21Q99679 349 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 NRTNQ99748 197 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 SCNM1Q9BWG6 230 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 CDC42EP4Q9H3Q1 356 aaKnown RBP14.06□□□□□ -0.16
HLA-F-229ENST00000489502 TMEM9Q9P0T7 183 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.06□□□□□ -0.16
HLA-F-229ENST00000489502 CLCA2Q9UQC9 943 aa14.06□□□□□ -0.16
HLA-F-229ENST00000489502 V9GYY5 206 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms