RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 HACD1B0YJ81 288 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 CCL22O00626 93 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 STX7O15400 261 aaKnown RBP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 MT-ND3P03897 115 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 CCNYL3P0C7X3 344 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 PRSS56P0CW18 603 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 RNF224P0DH78 156 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 MSH3P20585 1137 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 PSMB4P28070 264 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 AKT1P31749 480 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 RORAP35398 523 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 PRLHRP49683 370 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 CDKN1CP49918 316 aaPredicted RBP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 TUBB4BP68371 445 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 HSD11B2P80365 405 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 XRCC4Q13426 336 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 TUBB2AQ13885 445 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 TAF1AQ15573 450 aaPredicted RBP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 LONRF2Q1L5Z9 754 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 KRTAP21-3Q3LHN1 58 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 NADK2Q4G0N4 442 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 PLEKHS1Q5SXH7 462 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 AADACL2Q6P093 401 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 FAM198BQ6UWH4 519 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 OOSP2Q86WS3 158 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 RCOR2Q8IZ40 523 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 CALR3Q96L12 384 aaKnown RBP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 FAM118BQ9BPY3 351 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 TUBB2BQ9BVA1 445 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 TLR10Q9BXR5 811 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 CHST8Q9H2A9 424 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 ASB8Q9H765 288 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 TRHDEQ9UKU6 1024 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 POMT2Q9UKY4 750 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
ACTN4-206ENST00000489451 PCDHA13Q9Y5I0 950 aa11.44□□□□□ -0.58
ACTN4-206ENST00000489451 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 IGLV3-16A0A075B6K0 115 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 BTN3A3O00478 584 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 CPNE3O75131 537 aaKnown RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 SNRNP200O75643 2136 aaKnown RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 SCRG1O75711 98 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 SORBS2O94875 1100 aaKnown RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 ZBTB11O95625 1053 aaPredicted RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 APOC2P02655 101 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 POLR2CP19387 275 aaPredicted RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 LPOP22079 712 aaPredicted RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 PTGIRP43119 386 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 OTUD4Q01804 1114 aaKnown RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 IZUMO3Q5VZ72 239 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 PAPD7Q5XG87 772 aaKnown RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 C11orf63Q6NUN7 778 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 KLHL35Q6PF15 583 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 SYVN1Q86TM6 617 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 BPHLQ86WA6 291 aaPredicted RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 GAS2L3Q86XJ1 694 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 DSELQ8IZU8 1212 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 TXLNBQ8N3L3 684 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 TEX19Q8NA77 164 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 OR1L3Q8NH93 324 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 ACTL9Q8TC94 416 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 ZFPM2Q8WW38 1151 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 FSD1LQ9BXM9 530 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 GPR87Q9BY21 358 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 OR52A5Q9H2C5 316 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 FAM96AQ9H5X1 160 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 LATS2Q9NRM7 1088 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 KCND1Q9NSA2 647 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 ACSL5Q9ULC5 683 aa11.43□□□□□ -0.58
ACTN4-206ENST00000489451 FARSAQ9Y285 508 aaKnown RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 EPN1Q9Y6I3 576 aaPredicted RBP11.43□□□□□ -0.58
ACTN4-206ENST00000489451 LRBAP50851 2863 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ARGFXA6NJG6 315 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 H3BMH7 237 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 H7C0C1 242 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 PJA2O43164 708 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 HCRTR1O43613 425 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 LDB2O43679 373 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 CEACAM4O75871 244 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 POLBP06746 335 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ST6GAL1P15907 406 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 PDHA2P29803 388 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ATP5OP48047 213 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 GEMP55040 296 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 NAP1L1P55209 391 aaKnown RBP11.42□□□□□ -0.58
ACTN4-206ENST00000489451 TMPRSS15P98073 1019 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 SPARCL1Q14515 664 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 PRR30Q53SZ7 412 aaPredicted RBP11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ANKRD20A2Q5SQ80 823 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ANKRD20A1Q5TYW2 823 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ANKRD20A3Q5VUR7 823 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 ZNF385CQ66K41 422 aaPredicted RBP11.42□□□□□ -0.58
ACTN4-206ENST00000489451 CYB5D1Q6P9G0 228 aa11.42□□□□□ -0.58
ACTN4-206ENST00000489451 TMEM126BQ8IUX1 230 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms