RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CLNS1AP54105 237 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CDKL1Q00532 357 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 LMAN2Q12907 356 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 LRP8Q14114 963 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 TRIM25Q14258 630 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 PTPRCAPQ14761 206 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 TEAD2Q15562 447 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 TGFBIQ15582 683 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 TSNQ15631 228 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CDKN3Q16667 212 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 GEN1Q17RS7 908 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 MMEL1Q495T6 779 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 XKR7Q5GH72 579 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 PTRHD1Q6GMV3 140 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 BRAT1Q6PJG6 821 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 LINGO4Q6UY18 593 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CYHR1Q6ZMK1 362 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 TPGS1Q6ZTW0 290 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ARPINQ7Z6K5 226 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 HPS6Q86YV9 775 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 FAM9CQ8IZT9 166 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 MYO1HQ8N1T3 1032 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 SLC26A7Q8TE54 656 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 UBTD2Q8WUN7 234 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 NRG4Q8WWG1 115 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 POP5Q969H6 163 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 WBP2Q969T9 261 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 FAM136AQ96C01 138 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CLPTM1LQ96KA5 538 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 LMLNQ96KR4 655 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ASB16Q96NS5 453 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CDRT15Q96T59 188 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ECSITQ9BQ95 431 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 RPP25Q9BUL9 199 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 OSBPL1AQ9BXW6 950 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 SLC46A2Q9BY10 475 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 FAM126AQ9BYI3 521 aaPredicted RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 BRINP2Q9C0B6 783 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 KCNK12Q9HB15 430 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 SMOXQ9NWM0 555 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 MARK1Q9P0L2 795 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 SLC25A13Q9UJS0 675 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 PCTPQ9UKL6 214 aa8.33□□□□□ -1.08
VTI1A-207ENST00000489357 CNOT11Q9UKZ1 510 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
VTI1A-207ENST00000489357 ZNF318Q5VUA4 2279 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 IGLV3-16A0A075B6K0 115 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 C1orf232A0A0U1RR37 186 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 E2F3O00716 465 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ACOT8O14734 319 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 MRASO14807 208 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TRIM24O15164 1050 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 DNAJA2O60884 412 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 WDR47O94967 919 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 C8BP07358 591 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SRCP12931 536 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 GJA1P17302 382 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 HOXB6P17509 224 aaKnown RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 THOP1P52888 689 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PGGT1BP53609 377 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SESN3P58005 492 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 DCDC1P59894 354 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PSME3P61289 254 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ERVK-8P63133 956 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ZXDBP98169 803 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ZNF33BQ06732 778 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 BNIP2Q12982 314 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 MAD2L1Q13257 205 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SP140Q13342 867 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 MYLK3Q32MK0 819 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PDCD4Q53EL6 469 aaKnown RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 AGKQ53H12 422 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ARSJQ5FYB0 599 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PITRM1Q5JRX3 1037 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 FAM78AQ5JUQ0 283 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 OGFRL1Q5TC84 451 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TMEM198Q66K66 360 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 REP15Q6BDI9 236 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SULT1C3Q6IMI6 304 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 C22orf39Q6P5X5 142 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PARM1Q6UWI2 310 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 GPRIN3Q6ZVF9 776 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 FRA10AC1Q70Z53 315 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TAS2R42Q7RTR8 314 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 KIAA0907Q7Z7F0 614 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 CAMK1DQ8IU85 385 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PHYKPLQ8IUZ5 450 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 BBS7Q8IWZ6 715 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ALDH16A1Q8IZ83 802 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 CMTM8Q8IZV2 173 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 APCDD1Q8J025 514 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 PQLC1Q8N2U9 271 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 NXPE1Q8N323 547 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 TCAIMQ8N3R3 496 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 RYBPQ8N488 228 aaPredicted RBP8.32□□□□□ -1.08
VTI1A-207ENST00000489357 SLC44A3Q8N4M1 653 aa8.32□□□□□ -1.08
VTI1A-207ENST00000489357 ADCY4Q8NFM4 1077 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms